Gene BTH_II1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1231 
Symbol 
ID3845176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp1454107 
End bp1454811 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content62% 
IMG OID637838533 
ProductATP-dependent transcription regulator LuxR 
Protein accessionYP_439427 
Protein GI83716885 
COG category[K] Transcription 
COG ID[COG2771] DNA-binding HTH domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.681253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGATT TTCTTCAATT TTGGCTAAAC GAATTTTCCC GCAGTGAGAA CCCACAGCAC 
GTCAATTCCG TCTTGACCCG CGCGGCCGCC ACCCTGGGCT ACGAATACGC CGCCTACGGC
ATGCGCCGCC CTTTTCCGAT CAGCAATCCG CAGATCCTCA TGGTGTCGAA CTATCCCGAC
CGGTGGCAGG AGCGCTACAT CGAAGCGCGA TTCGCCAACG TCGACAGCGC GGTCAAGGCC
GCGCTCGGCA GCGACCGGCC GGTGACCTGG TCCGCATCGA CCAACGCGTC GAAGAGCGCG
TTCTGGGCCG AGGCGCTGTC GTTCGGCATC GCTCACGGCT GGTCGTCCGC GTCGAGGGGC
GCGGACGGCA CGATCGGCGT GCTGTCGTTG TCGAGAAGGC AGGACGCGAT CGACACGGCC
GAGAAATTCC GCAACGAGAG CATCGTCCAT TGGCTCGCCA ACGTCGCCCA TGCGTCGATG
GCGCCGTTCC TGCCCGCCGC CGACGAATTC GATCCGGACC TCACGCGCCG GGAAACCGAT
GTGTTGAAGT GGACGGCCGA CGGCAAGACG GCGTACGAAA TCGCGCTGAT TCTCAGCATC
TCGGAAAGCA CCGTCAATTT TCACGTGAAG AACATCGTCT CCAAGCTGGG CTCCACGAAC
AAGATACAGG CGGTGGCCAA GGCGGCGCTG ATGGGCATGC TGTGA
 
Protein sequence
MHDFLQFWLN EFSRSENPQH VNSVLTRAAA TLGYEYAAYG MRRPFPISNP QILMVSNYPD 
RWQERYIEAR FANVDSAVKA ALGSDRPVTW SASTNASKSA FWAEALSFGI AHGWSSASRG
ADGTIGVLSL SRRQDAIDTA EKFRNESIVH WLANVAHASM APFLPAADEF DPDLTRRETD
VLKWTADGKT AYEIALILSI SESTVNFHVK NIVSKLGSTN KIQAVAKAAL MGML