| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1141 |
|---|
| Symbol | |
|---|
| ID | 3846531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 1329071 |
|---|
| End bp | 1330585 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637838444 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_439338 |
|---|
| Protein GI | 83717607 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3047] Outer membrane protein W |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.917542 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGACA AGCATCGCCG TCGACGTGCG CGCCGCGACT GGCGCGCCCC GGTGTCCTGC
TGGCTCGGCG CGACGCTGCT CGCGTGCGCG TGGTCCGCGC ACGCGCAGGA CAGCGGCGCG
GCGAGGTGGC GCGACGGCGC GGACGGCATC GGCTTCTTTC CGGGCGGCGA CGCGCCCGGC
TTCGACGCGA GCGCGTGGGG GCCGGTGCCG GGCGACGCGC GTCGCGCGGC GTTGGACGCG
GGGCGCGGCG CGGCGTCGAA CGGCGGCGCG GCTTGGAGCG GCGCGCCGGA CGGGGCGGGC
GCGTCGGCGG CATCGAACGC GTTCGCCGCG GCCCCGAACG CGCCGCGTCC GCGCAAGCTG
ACCGATGAGA AGATCATGCT CGGCCAGCGC GTCGCGCCGG CCGCCGCGCC GCGCGCCGAG
GGCGATGACG GCATCGGCTT CGCCGACGCG CCCGGCGGGG CGCCGGCGGA CGTCGCGGCG
TCATCCGCCG CGTGCGGCGG CGGCGGGTGT GCGGCCGACG GTGCCGGCGA CGGCGGCGCG
ACGCGCCGCC CGCCCGCCGA CGCGACGCCG CGCTTCATCG CCGGCGTGCG CTACGACCGG
ATGCCGTACG AGCTGCACCC GATCGATCCG GAGATGCTGC CCGATTTGCC GGAGGCGCAG
GGCCCGACGC TCCTCGAGCA GTTGCGGGGC GACGACAGCA ACATGATCGG GATCGGCTGG
CACTACGTGC TGTCGACGGG GCGCTCGACG CCCGTGACGA CGACGACGGC GGCGCTCGGC
ATCGGCAGCT TCGCGAATCC GGGCTCCGCG GTGTCGATCA GCAATACGAA CACGCCGGCG
TTCACGTTCA CGCACTTCTT CGGCGAGCAC GTCGCGGCCG AGGTTGTCGC GGGGATTCCC
CCCAAGCTGA CGATGCGCGG GCACGGCAGC ATCGGGCTGC CGTTCGACAA GATCTTCTCG
GGCGTGCAGG GCCGGTTGCC GCTCGTCGAT CTCGGCAACA CGCAGAGCAA CCCGCTCGGC
ACGACGCGCG CGTGGCTTGG CTCGGCCGTG TTCAAGTATT ACCTCGGCAA GCGCGAGGAC
CGGCTCCGGC CGTACGTCGG CCTCGGACTC AGCTACACGC GCTTCACGAA CACGAACCTG
AACCCGGTGT TCGCACGCAA GCTCGCGTCG CTCGGCGGCC TGCTGTCGGC GGGCATCTCG
CTTGGCGACC TGCAATCGCT GCTCGCCGAT CCGGGCGCGC TCGACCGGCT GCTGCAGGCG
GGCGCGAACC TGATCCTGCC GAACGGCGTG CGCGCGACGG CCAACGTGAA AAGCGCATGG
ACGCCCGTGT TCGTCGTCGG CGCGAACTAC CAGCTCACGC GCCAGCTGTC GCTGTCGACC
GCGCTGTCGT ACATTCCGCT GAAGGCGGCG ATCACGGTCG ACATCAACGA TTCGAAGCGA
ATCCTCGCGT CGAACACGAC GACGCTTTCC GCGAACGTGC TGCTCTGCAC GATGCTGCTC
AACTACCGGT TCTGA
|
|---|
| Protein sequence | MGDKHRRRRA RRDWRAPVSC WLGATLLACA WSAHAQDSGA ARWRDGADGI GFFPGGDAPG
FDASAWGPVP GDARRAALDA GRGAASNGGA AWSGAPDGAG ASAASNAFAA APNAPRPRKL
TDEKIMLGQR VAPAAAPRAE GDDGIGFADA PGGAPADVAA SSAACGGGGC AADGAGDGGA
TRRPPADATP RFIAGVRYDR MPYELHPIDP EMLPDLPEAQ GPTLLEQLRG DDSNMIGIGW
HYVLSTGRST PVTTTTAALG IGSFANPGSA VSISNTNTPA FTFTHFFGEH VAAEVVAGIP
PKLTMRGHGS IGLPFDKIFS GVQGRLPLVD LGNTQSNPLG TTRAWLGSAV FKYYLGKRED
RLRPYVGLGL SYTRFTNTNL NPVFARKLAS LGGLLSAGIS LGDLQSLLAD PGALDRLLQA
GANLILPNGV RATANVKSAW TPVFVVGANY QLTRQLSLST ALSYIPLKAA ITVDINDSKR
ILASNTTTLS ANVLLCTMLL NYRF
|
|---|
| |