| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1073 |
|---|
| Symbol | betB |
|---|
| ID | 3844481 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 1249002 |
|---|
| End bp | 1250480 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637838376 |
|---|
| Product | betaine aldehyde dehydrogenase |
|---|
| Protein accession | YP_439270 |
|---|
| Protein GI | 83718064 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01804] glycine betaine aldehyde dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0000506243 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTA TGTCCGTATA CGGTCTGCAA CGCCTTTACA TCGCCGGCGC CTATGCCGAC
GCCACGAGCG GCAAGACGTT CGACACGTTC GATCCCGCGA CGGGCGAGCT GCTCGCGAGC
GTCCAGCAAG CGAGCGCCGA CGACGTCGAA CGCGCGGTCG CATCCGCGCG CGAAGGCCAG
CGCGAATGGG CCGCGATGAC CTCGATGCAG CGCTCGCGCA TCCTGCGCCG CGCGGTCGAA
TTGCTGCGCG AGCGCAATGA CGCGCTCGCC GAGCTCGAAA TGCGCGACAC CGGCAAGCCG
ATCGCGGAAA CGCGCGCCGT CGACATCGTC ACGGGCGCCG ACGTGATCGA GTACTACGCG
GGCCTCGCGA CCGCGATCGA GGGCCTGCAA GTGCCGCTGC GCCCCGAATC GTTCGTCTAC
ACGCGGCGCG AGCCGCTCGG CGTGTGCGCG GGCATCGGCG CATGGAACTA CCCGATCCAG
ATCGCCTGCT GGAAAAGCGC GCCCGCGCTC GCCGCCGGCA ACGCCATGAT CTTCAAGCCG
AGCGAAGTCA CGCCGCTGTC CGCGCTCAAG CTCGCGGAGA TCTACACCGA GGCGGGCGTG
CCCGCCGGCG TGTTCAACGT CGTGCAGGGC GACGGCTCGG TCGGCGCGCT GCTGACCGCG
CACCCGGGGA TCGCGAAGGT ATCGTTCACG GGCGGCGTCG AAACCGGCAA GAAGGTGATG
TCGCTCGCCG GCGCGTCGTC GCTCAAGGAA GTGACGATGG AGCTGGGCGG CAAGTCGCCG
CTCATCGTGT TCGACGACGC CGACCTCGAT CGCGCGGCCG ACATCGCCGT CACTGCGAAC
TTCTTCAGCG CGGGCCAGGT GTGCACGAAC GGCACGCGCG TGTTCGTCCA GCAGGCGGTA
AAGGACGCTT TCGTCGAGCG CGTGCTCGAG CGCGTCGCGC GAATCCGCGT CGGCAAACCT
TCGGACCCCG ACACGAATTT CGGCCCGCTC GCGAGCGCCG CGCAGCTCGA CAAGGTGCTC
GGCTACATCG AGAGCGGCAA GGCTGAGGGC GCGAAGCTGC TCGCGGGCGG CGCGCGCCTC
GTGAACGATC ACTTCGCGAG CGGGCAGTAC GTCGCGCCGA CCGTGTTCGG CGATTGCCGC
GACGACATGA AGATCGTCCG TGAAGAGATC TTCGGCCCGG TGATGAGCAT CCTGTCGTTC
GAAACGGAAG ACGAAGCGAT CGCGCGCGCG AACGCGACCG AGTACGGCCT CGCGGCGGGC
GTCGTCACCG AGAACCTGTC GCGCGCGCAC CGCGCGATCC ATCGCCTCGA AGCCGGCATC
TGCTGGATCA ACACGTGGGG CGAGTCGCCC GCCGAGATGC CGGTTGGCGG CTACAAGCAA
TCCGGCGTCG GACGCGAGAA CGGCATCACG ACGCTCGAGC ACTACACTCG AATCAAATCG
GTTCAGGTCG AGCTCGGCCG CTATCAACCG GTGTTCTAA
|
|---|
| Protein sequence | MSAMSVYGLQ RLYIAGAYAD ATSGKTFDTF DPATGELLAS VQQASADDVE RAVASAREGQ
REWAAMTSMQ RSRILRRAVE LLRERNDALA ELEMRDTGKP IAETRAVDIV TGADVIEYYA
GLATAIEGLQ VPLRPESFVY TRREPLGVCA GIGAWNYPIQ IACWKSAPAL AAGNAMIFKP
SEVTPLSALK LAEIYTEAGV PAGVFNVVQG DGSVGALLTA HPGIAKVSFT GGVETGKKVM
SLAGASSLKE VTMELGGKSP LIVFDDADLD RAADIAVTAN FFSAGQVCTN GTRVFVQQAV
KDAFVERVLE RVARIRVGKP SDPDTNFGPL ASAAQLDKVL GYIESGKAEG AKLLAGGARL
VNDHFASGQY VAPTVFGDCR DDMKIVREEI FGPVMSILSF ETEDEAIARA NATEYGLAAG
VVTENLSRAH RAIHRLEAGI CWINTWGESP AEMPVGGYKQ SGVGRENGIT TLEHYTRIKS
VQVELGRYQP VF
|
|---|
| |