| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1010 |
|---|
| Symbol | |
|---|
| ID | 3845339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 1196765 |
|---|
| End bp | 1197961 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637838313 |
|---|
| Product | major facilitator family transporter |
|---|
| Protein accession | YP_439207 |
|---|
| Protein GI | 83716736 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGACGACT CCCCTAAAAG CCTTGCTGGC CTGCCGTCCT GTGCCATCGC ATCATGCCAG
TGGAGCATGG TGCTATGGGG CACGGCGTCA TACCTGTGCT CGACCGCGCA GAGCGCCGAC
GCGCTGATCG CCTATCGCGT GCTGCTCGGC ATCGGCATGG GGATGGAGTT CCCGGTCGCG
CAGACGCTCT TGTCCGAATT CGTCCCCGCC GCGAAGCGCG GCCGGCTGAT CGCGCTGATG
GACGGCTTCT GGCCGCTCGG CTTCATCACC GCCGGCATCG TGTCGTACTT CGTGCTGCCG
CTGTTCGGCT GGCGCACCGT GTTCGCGCTG CTCGCGCTGC CCGCCGTGTT CGTGCTCGTC
GTGCGCCGGC TCGTGCCGGA ATCGCCGCGC TGGCTCGAAC ATCGCGGCCG GCTCGCGCAA
GCCGAGCGCG TGCTCGCGCA CGTCGAGGCG AAGGTGATGA AGTCCGCGCG CGTATCGAGC
CTGCCCGCGC CGTCGCGGCT CGTCGAGCCG GCATGCGCGC ACGGCCGCGG CCCGTTCGGC
GAGATCTGGA GCGCCGCGTA CCGCCGCCGC ACGACGATGG TCTGGCTGCT ATGGTTCTTC
GCGCTGCTCG GCTTCTACGG TCTCACGTCG TGGCTCGGCG CGCTGTTGCA GCAGGCCGGC
TTCGCCGTCA CGCAATCGGT GTTCTACACC GTGCTGATCT CGCTCGGCGG CATTCCCGGG
TTCCTGTGCG CCGCGTGGCT CGTCGAGCGC TGGGGCCGCA AGCCGACCTG CATCGCGTCG
CTCGTCGGCG GCGGCGCAAT GGCGTACGCG TACGGCCAGA GCGCGCTGTT CGGCGGCAGC
GTGACGCTGC TCGTCTGCAC CGGGCTCGCG ATGCAGTTCT TCCTGTTCGG GATGTGGGCG
GTGCTCTACA CGTATACGCC GGAGCTCTAT GGCACCGGCG CGCGCGCCAC CGGCTCGGGT
TTCGCGTCGG CGATCGGGCG GGTCGGCTCG CTGATCGGGC CGTACGCGGT CGGCATCGTG
CTGCCCGTGT TCGGGCAAGG CGGCGTGTTC ACGCTCGGCG CGCTGTCGTT CGTCGTCGCC
GCGCTGGCGG TGGCCGCGCT GGGGATCGAG ACGAAAGGGC TCGCGCTCGA AGCGCTCGCA
TCGACGAACG CCGCAAACGC CACCGCGCAC GACGCCGCGG GCGCGGCGGC GAACTGA
|
|---|
| Protein sequence | MDDSPKSLAG LPSCAIASCQ WSMVLWGTAS YLCSTAQSAD ALIAYRVLLG IGMGMEFPVA
QTLLSEFVPA AKRGRLIALM DGFWPLGFIT AGIVSYFVLP LFGWRTVFAL LALPAVFVLV
VRRLVPESPR WLEHRGRLAQ AERVLAHVEA KVMKSARVSS LPAPSRLVEP ACAHGRGPFG
EIWSAAYRRR TTMVWLLWFF ALLGFYGLTS WLGALLQQAG FAVTQSVFYT VLISLGGIPG
FLCAAWLVER WGRKPTCIAS LVGGGAMAYA YGQSALFGGS VTLLVCTGLA MQFFLFGMWA
VLYTYTPELY GTGARATGSG FASAIGRVGS LIGPYAVGIV LPVFGQGGVF TLGALSFVVA
ALAVAALGIE TKGLALEALA STNAANATAH DAAGAAAN
|
|---|
| |