Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II0750 |
Symbol | |
ID | 3845166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | + |
Start bp | 879024 |
End bp | 880106 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637838053 |
Product | type III secretion system protein HrcU |
Protein accession | YP_438947 |
Protein GI | 83717264 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1377] Flagellar biosynthesis pathway, component FlhB |
TIGRFAM ID | [TIGR01404] type III secretion protein, YscU/HrpY family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0905461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGAAG AGAAAACCGA AGAGCCCACC GAGCGGAAGC TGAAGAAGGC CCGGGAGAAG GGCCAGGTCG CGAAGAGCAA GGACGTCGCG GACGCGGCGA CGCTGGCGGC CGCGATCGGC GTGCTGACGG CGGGCGAGGC GATGCTGACG GGCGGCCTGT CGCGCGCGAT CCGCACCGCG CTCGATTTCG TGCACGGCGA GCGCACGCCG CAGGCGACGC TCGCCGCGTT GCACGATCTC GCCGCGAGCG CCGGGCTGAC GATGCTGCCG TTCGTCGCCG CCGCGATCGT CGCGGGCGTT GCATCGCAAG CGCCGCAGGC GGGTTTCATG ATCACGCTCG AACCCGTGAT GCCGAAGTTC GACGCGATCA GCCCGATGGC GGGGATCAAG CGGATCTTCT CGACGAAATC GCTGCTCGAG CTCGTGAAGA TGATCGTCAA GGCGATCGTG CTCACGTGCG TGATCTGGAA GATGATGACA TCGCTGTTTC CGCTCGTCGT CGCGAGCGTG TACGAGGCGA CGCCGCAGCT TTCGCGCGTG CTGTGGACCG TGCTGATGAA ACTGTTCGGC GTCGTCGCGC TCGTCGTCGC GGTGTTCGCC GCGGCCGATT ACAAGATCTC GCGCGCGATG TTCATCCGCG ACAACCGGAT GACGAAGGAG GAGACCAAGC GCGAGCACAA GGAGAGCGAG GGCGATCCGC ACACGAAGGG CGAGCGCCGC CGGCTCGCGC GCGAGATCGC GACGAGCGCG CCGCCGCGGC AGAAGGTCGG CCAGGCGAAC GTGCTCGTCG TCAACCCGAC GCACTACGCG GTCGCGATCC GCTACGCGCC CGACGAGCAT CCGTTGCCGC GGGTGATCGA GAAAGCCGTC GACGACGGCG CGCTCGCGCT GCGCCGCCAC GCGCACGCGC TCGGCGTGCC GATCGTCGGC AACCCGAGCG TCGCGCGCGC GCTGTACCGC GTCGAGCGCG ACGCGGCGAT TCCCGAAGAA CTGTTCGAAA CGGTGGCCGC GATCCTGCGC TGGGTCGAGT CCATCTCGGG CGTGCGCGCC GACGCCGCCG TTCCCTGCGC GAGGTCGTCA TGA
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Protein sequence | MAEEKTEEPT ERKLKKAREK GQVAKSKDVA DAATLAAAIG VLTAGEAMLT GGLSRAIRTA LDFVHGERTP QATLAALHDL AASAGLTMLP FVAAAIVAGV ASQAPQAGFM ITLEPVMPKF DAISPMAGIK RIFSTKSLLE LVKMIVKAIV LTCVIWKMMT SLFPLVVASV YEATPQLSRV LWTVLMKLFG VVALVVAVFA AADYKISRAM FIRDNRMTKE ETKREHKESE GDPHTKGERR RLAREIATSA PPRQKVGQAN VLVVNPTHYA VAIRYAPDEH PLPRVIEKAV DDGALALRRH AHALGVPIVG NPSVARALYR VERDAAIPEE LFETVAAILR WVESISGVRA DAAVPCARSS
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