| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0645 |
|---|
| Symbol | |
|---|
| ID | 3844734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 754008 |
|---|
| End bp | 754847 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637837950 |
|---|
| Product | polyamine ABC transporter, permease protein |
|---|
| Protein accession | YP_438844 |
|---|
| Protein GI | 83717787 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.637437 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTGC TGGCGAAGCC GCTCTTCGCG CCGCACATGT CGGGGATCGA GCGCGCATGG
TACTTCGCGC TGCGCGGCCT CGTCGTGCTG ACGCTGCTGT ATTTGATCCT GCCCGTGCTC
GCGATCGTGC CGCTGTCATT CTCGTCGAGC ACGTTCCTCG TCTACCCGAT TCCGGGCTTC
TCGATGCGCT GGTACGAGAA CCTGCTCATG TCCGACGAGT GGCGAATGGC CGCGAAGAAC
AGCTTCATCG TCGCGCCGGC CGCGACGCTC GTCGCGACCG TGCTCGGCAC GCTCGCCGCG
ATCGGTCTCA CGAAGACCGA TTTTCGCGGC AAGGGGCTGC TGATGGCGGT GCTGCTGTCG
CCGATGATCG TGCCCGTCGT GGTCGTGGGC GTCGGCATGT ATCTGTTCTT CGCGCCGCTC
GGCCTCGCGA ACACGTACAC GGGGCTCATC TGCGCGCACG CGGCGCTCGG CGTGCCGTTC
GTCGTGACGA CCGTCGCCGC GACGCTGCAG GGTTTCGACC AGAATCTCGT GCGCGCGAGC
CAGTCCCTCG GCGCGAATCC GGTGACGACG TTCTTTCGCG TGACGCTGCC CGTGATCGCC
CCGGGCGTGA TGTCGGGCGG GCTGTTCGCG TTCGCGACGT CGTTCGACGA AGTGGTCGTC
ACGCTGTTTC TCGCGGGTGC CGATCAGACG ACGCTGCCGC GCCAGATGTT TACCGGCATT
CGCGAGAACA TCAGCCCGAC GATTGCAGCG CTCGCGACGA TTCTGATCGT GTTCTCGACG
TGTCTGCTGC TCGCGCTCGA ATGGCTGCGC GGGCGCAACG CGAAGCGCGC GGTGAGCTGA
|
|---|
| Protein sequence | MKLLAKPLFA PHMSGIERAW YFALRGLVVL TLLYLILPVL AIVPLSFSSS TFLVYPIPGF
SMRWYENLLM SDEWRMAAKN SFIVAPAATL VATVLGTLAA IGLTKTDFRG KGLLMAVLLS
PMIVPVVVVG VGMYLFFAPL GLANTYTGLI CAHAALGVPF VVTTVAATLQ GFDQNLVRAS
QSLGANPVTT FFRVTLPVIA PGVMSGGLFA FATSFDEVVV TLFLAGADQT TLPRQMFTGI
RENISPTIAA LATILIVFST CLLLALEWLR GRNAKRAVS
|
|---|
| |