| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0546 |
|---|
| Symbol | |
|---|
| ID | 3845817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 648372 |
|---|
| End bp | 649562 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637837851 |
|---|
| Product | capsular polysaccharide biosynthesis/export periplasmic protein |
|---|
| Protein accession | YP_438746 |
|---|
| Protein GI | 83718244 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGCAA AAGATATGTT GAATCGTTCG CTTAGACCCC TGGCGCTCGC CGTCGCGGCT
GCCGTGCTGT TGCAGGCGTG CGCGACGGCG CCCGGCAATT ATCTCGACAC GTCGCGCCTC
GACGACAAGG ATGCGCAGCT TGCCGAGCAT TACAACGTGC AGCTCATCAC CGCGCAACTG
GTCGTATCGC AGGCCGACGC GCAGCGCAAG GAGCGGCCGT TGCCGCCGGC GCGCTTCGTC
GACCCGGCGC AGTACGTGTA CCGTATCGCG CCGCAGGACA TTCTCGGCGT GACCGTGTGG
GATCACCCGG AGCTGACGAC GCCGCAGGGA CAGTCGTTCT CGAGCGGCGG CAACACGACG
CAGACCGTCG CGGGCGCGCT GCAGCAGCCT TATGCGAACG CGCTGCCCGG CCAGGCCGAT
CCGTACGGGC AGACGGTGAT GTCCGACGGC ACGATCTATT TTCCGTTCGT CGGCCGGCTG
CGTGCGGCGG GCAAGACGGT CGGCCAGGTG CGCGACGAGC TCGCGGCGCG GCTCGCGCGT
TACGTGAAGA ATCCGCAGGT CGACGTGCGC GTGCTGTCGT ATCGCAGCCA GAAGGTGCAG
GTGACGGGCG AAGTGAAGAC GCCCGGCCCG CTCGCGATCA CCGACGTGCC GCTCACGCTC
GTCGATGCGA TCACGCGCTC GGGCGGCTCG ACGAACGAGG CCGATCTGCA GCGCGTGCGC
CTCACGCGCG ACGGCAAGTT TTATCAGCTC GACGCGAACG GCATGCTCGA TCGCGGCGAC
GTCACGCAGA ACGTGATGCT GCAGCCGGGC GACATCGTCA ACGTGCCGGA CCGCGGCGAC
AGCCGGGTGT TCGTGATGGG CGAGGTGAAG ACGCCCGCGA CGGTGCCGAT GCTCAAGGGG
CGCCTGACGA TCGCCGACGC GCTCACGGCG GGCGGCGGCA TTCTCGATAC CGATGCGAAT
CCGCGTCAGG TGTACGTGCT GCGCGATCTG CAGGACAAGC CGAACACGCC CGACATTTTC
CGCCTCGACA TGACGCAGCC CGACGCGCTG ATGCTCTCGA GCCGATTCCA GTTGAAGCCG
CTCGACGTCG TGTACGTCGG CACGTCGGGA TCGGTGCGCT TCAACCGCCT GCTGCAGCAG
ATTTTCCCGA CGATCCAGTC GATTTACTAC ATGAAGCAGA TCACGCGCTG A
|
|---|
| Protein sequence | MVAKDMLNRS LRPLALAVAA AVLLQACATA PGNYLDTSRL DDKDAQLAEH YNVQLITAQL
VVSQADAQRK ERPLPPARFV DPAQYVYRIA PQDILGVTVW DHPELTTPQG QSFSSGGNTT
QTVAGALQQP YANALPGQAD PYGQTVMSDG TIYFPFVGRL RAAGKTVGQV RDELAARLAR
YVKNPQVDVR VLSYRSQKVQ VTGEVKTPGP LAITDVPLTL VDAITRSGGS TNEADLQRVR
LTRDGKFYQL DANGMLDRGD VTQNVMLQPG DIVNVPDRGD SRVFVMGEVK TPATVPMLKG
RLTIADALTA GGGILDTDAN PRQVYVLRDL QDKPNTPDIF RLDMTQPDAL MLSSRFQLKP
LDVVYVGTSG SVRFNRLLQQ IFPTIQSIYY MKQITR
|
|---|
| |