Gene BTH_II0454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II0454 
Symbol 
ID3846028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp542974 
End bp543930 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content71% 
IMG OID637837759 
Productdecarboxylase family protein 
Protein accessionYP_438654 
Protein GI83716305 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCACC CGCCCCCGCC ACGCGTCAAG CGCCGCCGCG CGTCCGCCGC CGCCCCCGCC 
GGCGCGCCTG CCGCCGGAAA GCGCGCGACG CCCCGTCGCG CGCGCATCGC GCCGAAGCGC
CGCGCGCCGC TGCCGGCCAC CGTCGAGCGG CTCGTATCGA GCCCGACGTA CCGGCAGGCC
GACGAGGATC TCGCGTTCCT GCAGCGCCCC GAAATGTGCG GCGTGCGCCT GCAGCTCGAC
TACTGGAAGA CCGAGGAAAC GCTGCAGCGC TTCGGCATCT GCGATACGGT CGTCGTCTAC
GGCAGCACGC GGATCTCGGC GCCCGCCATC GCGCGCACGA GGCTCGCCGA CGCGCAGCGC
AGGCTCGCCG AGCGCCCGAA CGATCCCGAG CGCCGCCATG CGGTCAGCAT CGCGGTGCGG
CTGCTCGAGC GCAGCCACTA CTATGGCGTC GCGCGCGATC TCGGCCGGCT CGTCGGCGAG
ACCGGCCGCT CGCCGCATCC GCGGCGCCTC ACGATCATCA CGGGCGGCGG CCCGGGCATC
ATGGAGGCGG CCAATCGCGG CGCGCACGAC GCAGGCGCGC CGAACATCGG GCTCAACATC
ACGCTGCCGC GCGAGCAATA TCCGAATCCG TACGTGACGC CCGAGCTGTG CTTTCGCTTC
CACTACTTCG CGATCCGCAA GCTGCATCTG CTCGAGCGCG CGAAGGCCGC CGTGTTCTTC
CCGGGCGGCT ACGGCACCTG CGACGAACTG TTCGAAGTGC TCACGCTGTT GCAAACCCGC
AAGATCGCAC CGCTGCCGGT CGTGCTGGTC GGCCGCGCGT TCTGGCGCTC GGCGGTCGAT
TTCGGTTTTT TCGTCGACGA AGGGATGATC GATCCGCACG ACATGGAGCT GTTCCGGTTC
TGCGAAACCG CCGACGAGAT CTGGGCCGCG ATCGGCGGCC CGCATAGCCC CGCATAA
 
Protein sequence
MNHPPPPRVK RRRASAAAPA GAPAAGKRAT PRRARIAPKR RAPLPATVER LVSSPTYRQA 
DEDLAFLQRP EMCGVRLQLD YWKTEETLQR FGICDTVVVY GSTRISAPAI ARTRLADAQR
RLAERPNDPE RRHAVSIAVR LLERSHYYGV ARDLGRLVGE TGRSPHPRRL TIITGGGPGI
MEAANRGAHD AGAPNIGLNI TLPREQYPNP YVTPELCFRF HYFAIRKLHL LERAKAAVFF
PGGYGTCDEL FEVLTLLQTR KIAPLPVVLV GRAFWRSAVD FGFFVDEGMI DPHDMELFRF
CETADEIWAA IGGPHSPA