Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II0410 |
Symbol | deoC |
ID | 3846686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | + |
Start bp | 494631 |
End bp | 495416 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637837715 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_438610 |
Protein GI | 83716906 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCTTT CGTTGAATCG CAACCAATTG ACCGAAGCGG CGCTGAAGGC GCTGCACCTG ATCGACCTCA CGTCGCTGAA CGACGACGAC ACCGACGACA GCATCGCCGC GCTCGCCGCG TCGGCCGACA CGCCGGTCGG CACGCCGGCC GCGCTGTGCG TGTATCCGCG CTTCGTCGGC GTCGCGCATG CGGCGCTCGC GCGGCACGGG CTCGTGCTGC CGGTGGCGAC CGTCGTGAAC TTTCCGCACG GCGAGGCCGA TCCGGACGCG GCCGCGCGCG AGACGGCCGA CGCGCTCGCG CGCGGCGCGG ACGAGATCGA TGTCGTGTTT CCGTATCGCG CGCTCGCCGA CGGCAACGAG CGGATCGGGC GCGAGCTCGT CGCGCAATGC CGCGCGGCGG CGGGCAGCCA GTGTCTGAAG GTGATCCTCG AGACGGGCGA GTTGCGCGAC GCAGCGGCGA TCCGCCGCGC GAGCGAGATC GCGATCGAGG AGGGGGCGGA TTTTCTGAAG ACGTCGACAG GCAAGGTCGC GGTGAACGCG ACGCTCGACG CGGCGGCCGT GATGCTCGCG ACGATCCGCG TCGCGGGCCG CACGGTCGGC TTCAAGGCGG CGGGCGGCGT GCGCACCGCG CAGGATGCGG CGCAATACCT GTCGCTCGCG CAGCGCGAGC TCGGCCCGGG CTATCTGACG AGCGCGACGT TTCGCTTCGG CGCGTCGGGG CTGCTCGGGA ATCTGCTCGA GACGCTCGGG CACCGGGCGG GGGCGACGCG CAGCGGGGGG TATTGA
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Protein sequence | MELSLNRNQL TEAALKALHL IDLTSLNDDD TDDSIAALAA SADTPVGTPA ALCVYPRFVG VAHAALARHG LVLPVATVVN FPHGEADPDA AARETADALA RGADEIDVVF PYRALADGNE RIGRELVAQC RAAAGSQCLK VILETGELRD AAAIRRASEI AIEEGADFLK TSTGKVAVNA TLDAAAVMLA TIRVAGRTVG FKAAGGVRTA QDAAQYLSLA QRELGPGYLT SATFRFGASG LLGNLLETLG HRAGATRSGG Y
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