| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0311 |
|---|
| Symbol | |
|---|
| ID | 3844688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 380699 |
|---|
| End bp | 382120 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637837616 |
|---|
| Product | sphingosine-1-phosphate lyase |
|---|
| Protein accession | YP_438512 |
|---|
| Protein GI | 83718034 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0935746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCTCG AAGAAGGCAT CAAGCGGCTC TATCCGTATG CAACGGAATT CGGCGCGATG
CACGGATTTC CGGAACATGG GTTGTCGCGC GAGCGCTTGC TCGACGAGCT TCGGTCGATG
GCCGTGCGAG AAGATCGCAA GTGGGAGAGC GGCCGCTGCT CGGGCACGAT GTATTGCGGT
GACCACGAAC ATTATGCGTT CCTTAACGAA GCGTACGGGC TTTTCAGCCA CGTGAACGCG
CTGCAGCGCG ACCTGTGTCC GAGCATGAGC CGGATGGAAA GCGAGATCGT CGGCATGACG
GTGGCCATGC TGCACGGCGA AGCCGTGGCC GGGCACGGCG GCGCGCATCG CGCATGCGGC
GTGCTGAGCC TCGGCGGCAC CGAGAGCATT CTGAATGCGA CACTCGCGTA TCGCGAGAAA
GCGCGCGCCG AGCGCGGCAT CGATCGGCCG CGGATGATCT GGCCGGCGTC CGCGCATCCC
GCGTTTCGCA AGGCCGCGCA TCTGTTCGGC TTCGATGTGA CCGTCGCGCC GGTCGATCCG
GACACGATGC AGGTCGACGC CGATTTCGTG CGCGATGCGA TCGACGCGAA TACGGTGATG
CTCGTGGGCT CGGCGTGCAA TTACCCGTAC GGCACCGTCG ATCCGATCGA GGCGCTGTCG
GAGATCGCGG TCGAAAAGGA GGTGTGGCTG CACGTGGACG GCTGTCTGGG CGGCTGGATG
CTGCCGTGGG GCGAGGAGCT GGGTTATCCG AACATTCCGG CATTCGATTT TCGCCTGCCT
GGCGTCACGT CGATCTCGGC GGATACGCAC AAGTTCGGCT ACGGCCCGAA GGGCGGCTCG
GTGCTCGCGT GGCGCGACGC GAGCTTTCGG CGCTATCAGT ATTTTTTGAT GACCGATTGG
GTGGGCGGCG TCTACGGCTC ACCTGGCCTG GCCGGCAGCC GCTCGGGCGG CCTGATCGCC
GCGACGTGGG CGGCGCTGCG CGGCCTCGGG CGCGAAGGCT ACCGTGCACG CGCAAGGGCG
ATTTTCGATA CGGCGTTCGA CATGCAGGCC GCGGTTCGCG CGATTCCGGA ACTGCGCGTG
CTCGGCAAGC CGACGTTCTG CTTCGCGTTC GCGTCGGACG CGTTCGACAT CTATCACGTG
AACGATTTCA TGCGTCGACA AGGCTGGCGC TTCAACGGGC TTCAGCATCC AGACGCGCTG
CACATGTGCG TGACGGGGCC GCAGACGCAG CCGGGCGTCG CCAAGCGGTT CCGGCAGGAT
CTCGGCGCGG CGGTTGACTA CGCGCGACGT CACACGCATG CGCGCGCGCA ATCGAGCGGC
GTTTATGGCG GCGATTCGGC GGGGCTCGAT TTGCGCGACG ACGCGCAGGC GAGGGCGTTC
TTCACGCAGG TGCTCGATTT GTTTACCGAC TGTCCGCTTT AG
|
|---|
| Protein sequence | MDLEEGIKRL YPYATEFGAM HGFPEHGLSR ERLLDELRSM AVREDRKWES GRCSGTMYCG
DHEHYAFLNE AYGLFSHVNA LQRDLCPSMS RMESEIVGMT VAMLHGEAVA GHGGAHRACG
VLSLGGTESI LNATLAYREK ARAERGIDRP RMIWPASAHP AFRKAAHLFG FDVTVAPVDP
DTMQVDADFV RDAIDANTVM LVGSACNYPY GTVDPIEALS EIAVEKEVWL HVDGCLGGWM
LPWGEELGYP NIPAFDFRLP GVTSISADTH KFGYGPKGGS VLAWRDASFR RYQYFLMTDW
VGGVYGSPGL AGSRSGGLIA ATWAALRGLG REGYRARARA IFDTAFDMQA AVRAIPELRV
LGKPTFCFAF ASDAFDIYHV NDFMRRQGWR FNGLQHPDAL HMCVTGPQTQ PGVAKRFRQD
LGAAVDYARR HTHARAQSSG VYGGDSAGLD LRDDAQARAF FTQVLDLFTD CPL
|
|---|
| |