| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0171 |
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| Symbol | fliF |
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| ID | 3845726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | + |
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| Start bp | 205598 |
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| End bp | 207253 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637837477 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_438373 |
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| Protein GI | 83718135 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTAGCCA AACTCAAAGC TGCCGTCGTC AGTCGGCTTC CATCGAACCT GCCGTCGTTG
ATGCCGTCGC CGGCCGCGTT GTCGCGGCTG ATCCCGCTCG TCGTGCTCGC GGTCGCGTTG
ACCGCCGCGG CGACGCTCTA CATGCGCTAC GACCAAGCGA ATTACAAGCC GCTGTTCGGC
GCGCGCGAGC CGGTGCAACT CGATGACGTC GTGTCGGCGC TCGACGCCCA GCGCATCCCG
TACCGCATTC ATCCGGATAC CGGGCAGGTG CTCGTCGCGC GCTCGGATGT CGCGCGGGCG
AGGATGATGC TCGCCGCGCG CGGCGTCACC GCGAAGGCGG CGCCCGGGCT CGAGCAGATC
GATCAGGACG ACCCGCTCGG CACGAGCCAG TTCGTGCAGG ACGTGCGATT CCGCCGGGGC
CTCGAGAGCG AGCTGGCGCA GAGCATTGCG ACGCTCGACC CGGTCGAGCG CGCCCGCGTG
CATTTGTCGA TTGCGAAGTC GTCGTCGTTC GTGATGATGG ATGGCGACAA GAGCGCCGCG
TCCGTCGTGT TGACGCTCAA GCCGGGAGCG CGTCTTGCGA AGGAGCAGAT CGCCGCGGTC
ATCAATCTCG TCGCCGGCAG CGTGCCGAAT CTGGCGCCGG GGAAGGTTTC GGTCGTCGAT
CAGCACGGCG CGTTTTTGTC CGCGCGCGTC GATCTGGACG GTGATCTGAC GGGCAACGAC
GAAATCGCGG CGCGGTTTCG CGACGACGTG ACGCGCAATG TCGAGGATTT GCTGGCGCCG
TCGCTCGGCC CCGGGAACTT CCGCGTCAGC GTGACGGCGG TCGTCAACAA CGACCGTGTC
GAGGAAACGC GCGAACAGTT CGGCGAAGCA CCGAAGGTGA TGAACGAGGC GACCCGCAAC
GAGCAGAACC GCGATCGCGT CGCGCTTGGC GTGCCGGGCT CGTTGAGCAA CCGTCCGGTC
GACGTGCCCG CGTCCGGCCC GGACGTCGAC GGCGGCTCGC GGCGCAACGC GACGACGCGC
CAGTTCGCAT ACGACCGCAA CATCACGCAG ATCAAGCGCG GGCGCGGGCA GCTCGAGAAG
CTGAGCGTCG CCGTCGTGCT CAACAACGCG GTGTCGCCCA CCAAGGGCAA GCCCTGGCAG
CCGGATCAAT TGCGACGCAT CGACGACATT CTGCGCAGCG GCCTTGGCAT AGACAAGCAG
CGCGGCGACC AGCTGATCGT GTCGTCGCTC GACTTTGCCG CGCCGGCGCC GGCCGAGCCG
TGGTGGAAGG AGCGCGACAC CCTCGAGCAG GGCGGCTGGT ATCTGACCTA CGCGCTGGCG
GCCCTGTTCG GCTACTTGCT GCTCGCGCGG CCGATGCTGC GCATGCTGCA GCAATGGATG
CAACACCGGT ATGGCGCGCC GCCCGCCGCC GCGCCGGCGT CCCGGCTGCA GGCCCCTGAG
GGCGGCGATG CGCAAGCGGC GCTGCCGGCC CCGGACGACG CGCGGCCGCC CCTCGGCGCA
ATGTTGCCCC TCCTCGACGA CGTGGAGCTG CCGCCTGCCG ATTCGGGCGT CGAGGTGCTG
ATCGGCCACT TGCGTTCGCT CTCCGAGAAG GAGCCCGAGC GCGTCGCTGA AGTCGTCAAA
CAATGGATAC GAAATGATGG AAACGCCAGT AGCTGA
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| Protein sequence | MLAKLKAAVV SRLPSNLPSL MPSPAALSRL IPLVVLAVAL TAAATLYMRY DQANYKPLFG
AREPVQLDDV VSALDAQRIP YRIHPDTGQV LVARSDVARA RMMLAARGVT AKAAPGLEQI
DQDDPLGTSQ FVQDVRFRRG LESELAQSIA TLDPVERARV HLSIAKSSSF VMMDGDKSAA
SVVLTLKPGA RLAKEQIAAV INLVAGSVPN LAPGKVSVVD QHGAFLSARV DLDGDLTGND
EIAARFRDDV TRNVEDLLAP SLGPGNFRVS VTAVVNNDRV EETREQFGEA PKVMNEATRN
EQNRDRVALG VPGSLSNRPV DVPASGPDVD GGSRRNATTR QFAYDRNITQ IKRGRGQLEK
LSVAVVLNNA VSPTKGKPWQ PDQLRRIDDI LRSGLGIDKQ RGDQLIVSSL DFAAPAPAEP
WWKERDTLEQ GGWYLTYALA ALFGYLLLAR PMLRMLQQWM QHRYGAPPAA APASRLQAPE
GGDAQAALPA PDDARPPLGA MLPLLDDVEL PPADSGVEVL IGHLRSLSEK EPERVAEVVK
QWIRNDGNAS S
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