| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0127 |
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| Symbol | |
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| ID | 3845516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | + |
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| Start bp | 146525 |
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| End bp | 150433 |
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| Gene Length | 3909 bp |
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| Protein Length | 1302 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637837433 |
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| Product | putative lipoprotein |
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| Protein accession | YP_438329 |
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| Protein GI | 83716562 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0534605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTACC TGAAACGTTT CTTCAGATTC GTCTTTTCGT GGCAGATGCT CGCGTGCATC
GCGGTGCTGC TCGTCTCCGT CGCCGTATGG TTCGTCGGCC CCTTGCTCGC GTTCGACGAG
TTGAGGCCGC TAGCGGGCGT CGTCGTGCGC GTCGCCGTCA TCGTCCTTCT GGTGGCGCTC
CTGGCGTTCT GGCTGATGCG CTGGCCGCTC AGCCCGGTCG GTGTCGCCGC GCTGTGTCTG
CTGATCTGGC ACGCGGGGCC GCTCTTCGCG TTCGGCGATC ACCGTCCGTT CGGACCTGCA
TGGGTTCGCG TGCTGATCGT CGCCGTGATT CTGTTCTGCT ACGCCGTCTA TGGCCTCTAT
CGCCTGTGGC AGGCGGTGCG GACGAACGAC GCATTGCTCA GGCGCATTCT CGATCCGTCG
GCGGGCAAGC CGGACGCGGC GGCGCGTGCG GACATCCGCG CGGTGAACGT GGCGGTGTCG
AAGGCGATCG GTCAGTTGAA GCGCTTGCGC GGCGGTGCAT TCGGCTGGCG GCGCTTGCTC
GAAAGCGGAC GCTATCTGTA CGAACTGCCG TGGTACATGA TGGTCGGCGC GCCTGGTGCG
GGCAAGACCG CGGCGATCGC GCGTTCCGGT CTGAAATTCC CGCTCGCGGA TCAAATGGAG
GCATCGACCG AGCGCGCTCG GGGCGGCACG ATCAATTGCG ACTGGTGGTT CGCCAATGAG
GCCGTGTTGA TCGATACGGC AGGCCGTTAC GCTCGGCACG AGGTGCCCGG CGACGAAGAG
GCGACGCTCG CCAACGAAGC GGAGTGGAAG GGCTTTCTCG GCCTGCTTCG CAAACATCGG
CCGCGCGCGC CGGTCAACGG TGTGGTCCTG TCGGTCAGCG TCGAGGATCT CGTCGGACGG
ACGCCGGCCG AGCGCACCGC GCATGCGGCC GCGCTGCGCG CCCGCCTCGG CGAGCTGCAT
CAGGAACTGG GCATTCATTT TCCGGTATAC GTGATCGTCA CGAAGCTCGA TTTGCTGCCG
GGCTTTCCGG AGTATTTCCA GTCGCTGACG GCTGAAGGGC GCACGCAGAT CTGGGGATTT
ACGCTGCCCT ACGACGCCGA GAACAGGAAG AGCGCGGTGG GTGCCCTGCG CGAGCATTGC
GCCGATGAAC TGAAGCGGCT GGAGATGCGC ATCGACGCCG GACTGAACAA CCGCCTGCTC
GAAGAGTACG AAAACGATCG CCGCAAGAGG CTGTATGCGT TGCCGCAGGA GTTCCGGAGC
CTGTCTGAGG CGTTGACGGA CATGCTGGGC CTCGTGTTTC TCGATTCGCG CTACGACGAC
GCCCAGTTGC AGAACACGCT GCGCGGCGTC TATTTCACGA GCGCCGAGCA GACGGATCAG
GTGATGGCCG CCGATCGCGA AACCATCCTG CAGCGCTTGA AGCGCCAGCT CGGCAGAATG
CTTGGCGGCG ACGCCGGGGC GCAGACGCGC GGTAACGGCG CGATGTCGGG CAGCCGCGGC
TATTTCCTGC GCGATGTGTT CCAGCACGTG ATCGTGCCGG AGGCGCACCT GGTTCGGCCG
AACGTCATGT GGGAAGTGCG CTTTCGCCTG ATGCGCTGGG CCGGACATCT GCTCGCCGTC
GCGCTGCTGG TCTGGCTGGC GAGTTCGCTG ACGGTGAGCT TCGACAGCAA TCGCGGCTAT
CTCGATGCGA TATCGGACAA GACGACCGCC CTCGCCGCGC GAGTCAACGC GTACAACAAG
GCGCCGAAAC CGGCAGGAGT CGCGGGCGTG CTGGACGGCT CTCGCGATCT TCCCCAGTAC
GGAAATCTCG ATCTCGAGGC GCCGGGCGCG AGCTTCCGCT ACGGCCTGTA TGTGGCGCCC
GGCATCGTCG ACGCGTCCGA CGCGACCTAT CGGAACCTGC TGCGCCGGAG CCTTCTGCCG
CAGATCGTGC GGCGTGTCGA GAATGCGCTG AGCGCGCAGA TCGATGCGAA GAATGCGGAC
GAGGTCTATC GCACGCTGAC GATCTACTTG ATGCTCTACG ACGCCGCGCG CCATGACGCG
AAGGCGGTGA AGGACTGGGT CATGCGCGAC TGGGAGCGCT CGGACAGCGC GGCCGAGATG
GGCGGACGCA ATCGGATGGC GCGGCACCTG GACGCGCTGT TCGTCGACGG TCAGCCGTTC
GAGCCGAGCG GACGCCAGAA CGCCGCGCTC GTTCAGCGCG CGCGGCTTTT CCTCAACGCG
AATCCGGCGC CGAGGCGGCT GTACGAGCGC GCGATGGCCG CGATCGAGAA AGAGGCGCCG
GAGAACTTCA CGCTCGCGCG CGCGGTCGGG CTTCAGGGCG CGGGAATCTT CAGGCTCGTC
GACGGTTCGC GATTTCAACG CGGCGTGCCG GGCTTGTATA CGTACGAAGG CTACCATCAG
GTGTTCAGCG CTCGGCTGCC CGAATTTCTC GCCCGCGCGC AAAGCGACGA TGCATGGGTG
ATGGGGAGCG CCGATTCCGC CGCGCGATGG GGCGACGCGA TCCGGAACAC GAAGATCGTT
GCAGGGCGCT CGGCGCTTGC CGACGACATT CGTCGCCAGT ACCTGACGGA TTACGGCAAC
TATTGGCAAC AGTATCTGGC GGACATTCGG CCCGTCTCGT CCGGGGAAAA CGGCGGGAGC
GGCACGCTCG CGTTCGACCT CGCGACGCTG CGCGCACTCG CCGCGCCCGA TTCGCCGCTC
GTGAGACTGG CGCGCGCCGT CGTTCGCGAA ACATCGTTGT CGGTCGTCGA CGCAAGGGAA
GACGCGTCGT TGACCGACAC GGCGCTTTCG GCGGTCGGGC GACGGTCCGG CACGGCGAAG
GAGGTTGCCG ACGGCGCGCA GAAACTGGCG GCGCGCAGGC CGGAGCAGCG CCTGGAGAAG
GAACTGGTGG ATAACCGCTT CGCGGCGCTG CGCGAGGTGG TGACGGGGCA GGCCGATACG
GGAAGCGGTC CCGCGATGAC GGACATGCCG ATCTCGTCGG GCGGCAAGGC GCTGCAGCTC
GATGCAATTC TCACGCTGAT CAACGAACAG TACACGCGTC TCGTCGTCGC CGACAACGCC
CTCTCGTCAC ACAGCATGCC GCCCGCGCTG GATATCGGCA CCACATTGCA AATGGAGGCG
GAGAAATTGC CCGCGCCGCT GCGCGCCGTG CTGGGCGGCA TCGCGACGCA AGCCGCCGAC
AAGGTCGGGC GCGAAGTGGG TTCGCTGCTC GCGATGCAGG TGGACTCGAG TGTCGGCAAG
GCGTGCCGCG CCGCCGTCGA CGGCAAGTAT CCGTTCGCGC GGAGCAGCCA GGAGGTGGAC
ATCGAGGATT TCAACCGCCT CTTCGCCGCG GGCGGGCTGT TCGACGAGTT CTTTCAGAAG
GCGCTTGCCG CGCATGTCGA CACCAACTCG AAGCCGTGGC GCTACAAGGC GTTGAACCCC
GGCATGCCGC CGATTCGGGG GCCGAGCCTC GAGCCGTTCG AGCGCGCCGC CGCGATTCGC
GAAGTGTTCT TTCGTGAGCC GGGCGCGAAG CGGATGGCGT GGAAGATGGA CGCGAAGGTG
GCGTCCATCG ATCCCGAGAT CACCGAGTTC ATCGTCGATG TCGACGGCCA GTCGCAGCGC
TATGTCCACG GTCCGGTGCT GCCGTTCTCC GTGAACTGGC CCGGGCCGCG CGGCGGCGCG
ATCGCGGAGA TCACCGCGAA GCCGCGGATT CGTCCCGATA CGTCGACGAT CACGACGACG
GGGCCCTGGG CGCTGTTTCG CCTGATCGAG CGCGGGCGGC TGACGGGCAC CACGTCGGCG
AGCCGGTTGA TGCTGGATTT CGATTTCGAC GGCCGGCGCG CGGCTCTGGA GCTCAGGACG
AACGGCCAGG CGAATCCGTT GACGAGCGGC TTGCTGACGA ATTTTCGCTG CCCGGGGAGC
CTCGGTTGA
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| Protein sequence | MSYLKRFFRF VFSWQMLACI AVLLVSVAVW FVGPLLAFDE LRPLAGVVVR VAVIVLLVAL
LAFWLMRWPL SPVGVAALCL LIWHAGPLFA FGDHRPFGPA WVRVLIVAVI LFCYAVYGLY
RLWQAVRTND ALLRRILDPS AGKPDAAARA DIRAVNVAVS KAIGQLKRLR GGAFGWRRLL
ESGRYLYELP WYMMVGAPGA GKTAAIARSG LKFPLADQME ASTERARGGT INCDWWFANE
AVLIDTAGRY ARHEVPGDEE ATLANEAEWK GFLGLLRKHR PRAPVNGVVL SVSVEDLVGR
TPAERTAHAA ALRARLGELH QELGIHFPVY VIVTKLDLLP GFPEYFQSLT AEGRTQIWGF
TLPYDAENRK SAVGALREHC ADELKRLEMR IDAGLNNRLL EEYENDRRKR LYALPQEFRS
LSEALTDMLG LVFLDSRYDD AQLQNTLRGV YFTSAEQTDQ VMAADRETIL QRLKRQLGRM
LGGDAGAQTR GNGAMSGSRG YFLRDVFQHV IVPEAHLVRP NVMWEVRFRL MRWAGHLLAV
ALLVWLASSL TVSFDSNRGY LDAISDKTTA LAARVNAYNK APKPAGVAGV LDGSRDLPQY
GNLDLEAPGA SFRYGLYVAP GIVDASDATY RNLLRRSLLP QIVRRVENAL SAQIDAKNAD
EVYRTLTIYL MLYDAARHDA KAVKDWVMRD WERSDSAAEM GGRNRMARHL DALFVDGQPF
EPSGRQNAAL VQRARLFLNA NPAPRRLYER AMAAIEKEAP ENFTLARAVG LQGAGIFRLV
DGSRFQRGVP GLYTYEGYHQ VFSARLPEFL ARAQSDDAWV MGSADSAARW GDAIRNTKIV
AGRSALADDI RRQYLTDYGN YWQQYLADIR PVSSGENGGS GTLAFDLATL RALAAPDSPL
VRLARAVVRE TSLSVVDARE DASLTDTALS AVGRRSGTAK EVADGAQKLA ARRPEQRLEK
ELVDNRFAAL REVVTGQADT GSGPAMTDMP ISSGGKALQL DAILTLINEQ YTRLVVADNA
LSSHSMPPAL DIGTTLQMEA EKLPAPLRAV LGGIATQAAD KVGREVGSLL AMQVDSSVGK
ACRAAVDGKY PFARSSQEVD IEDFNRLFAA GGLFDEFFQK ALAAHVDTNS KPWRYKALNP
GMPPIRGPSL EPFERAAAIR EVFFREPGAK RMAWKMDAKV ASIDPEITEF IVDVDGQSQR
YVHGPVLPFS VNWPGPRGGA IAEITAKPRI RPDTSTITTT GPWALFRLIE RGRLTGTTSA
SRLMLDFDFD GRRAALELRT NGQANPLTSG LLTNFRCPGS LG
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