Gene BTH_II0123 details

Gene Information

• Locus tag: BTH_II0123
• ID: 3846416
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007650
• Strand: +
• Start bp: 142705
• End bp: 143187
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637837429
• Product: hypothetical protein
• Protein accession: YP_438325
• Protein GI: 83717589
• COG category: [S] Function unknown
• COG ID: [COG3157] Hemolysin-coregulated protein (uncharacterized)
• TIGRFAM ID: [TIGR03344] type VI secretion system effector, Hcp1 family

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCACG ACATTTTCCT CAAGATCAAC GGTATCGATG GCGAGGCGGA AGACGCAACC 
CACAAGGGCG AAATCGAGGT CTTGAGCTGG TCGTGGAACG TCAGTCAGCA ATCGAACATG 
CACCTGGGTT CGGGTGGTGG CGCGGGCAAG GCGACGGTCG ACGATCTGCT GTTCGAACAT 
TACATCGATC GTGCCAGCCC GAATCTCGTT CAATACTGCT TGCTCGGCAA GCATATCGAC 
GAGGCCCGTC TCGTGGTGCG CAAGGCGGGC GGCAGCCCGC TCGAATACAT CAAGCTCACG 
ATGAACGACG TGCTCGTTAC CCAGGTGAGC CCGGCCGGCG TCGCTCAGGA CGAGTCGCGT 
CCGCGTGAGC TCGTTCGGCT GTCGTTCTCG CGCCTGAAGC AGGAGTATGT CGTCCAGAAC 
GCACAGGGCG GCAGCGGCGG CGCAATCACC GCGACTTTCG ACATCAAGAA GAACGCGGCG 
TAA 

 

Protein sequence

MSHDIFLKIN GIDGEAEDAT HKGEIEVLSW SWNVSQQSNM HLGSGGGAGK ATVDDLLFEH 
YIDRASPNLV QYCLLGKHID EARLVVRKAG GSPLEYIKLT MNDVLVTQVS PAGVAQDESR 
PRELVRLSFS RLKQEYVVQN AQGGSGGAIT ATFDIKKNAA