Gene BTH_II0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II0121 
Symbol 
ID3845546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp140432 
End bp140971 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content58% 
IMG OID637837427 
Producthypothetical protein 
Protein accessionYP_438323 
Protein GI83716514 
COG category[S] Function unknown 
COG ID[COG3516] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03358] type VI secretion protein, VC_A0107 family 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATAT CCAATAGCTC ACAGAAATTT ATCGCGCGCA ATCGTGCGCC TCGCGTCCAG 
ATCGAATACG ACGTCGAGAT TTACGGTTCC GAAAAGAAAG TCGAGCTTCC TTTCGTGATG
GGCGTGCTTG CGGACCTGTC GGGCAAGCCG ATCGAGCCTT TGCCGGCTGT CGGCGACCGC
AAGTTCTTCA GCATCGATAT CGACAATTTC GACGAGCGCA TGAAGGCAAT GAAGCCGCGT
GTCGCGTTCT CGGTGCCGAA CACCCTTTCC GGCGACGGTC AGTTGATGGT CGACATCACG
TTCGAAAGCA TGGACGACTT TTCCCCCGCG GCGATCGCGA AGAAGGTGGA CGCGTTGTCG
CAATTGCTGG ACGCACGCAC GCAGCTTGCC AATCTGCAGA CCTACATGGA CGGAAAGTCG
GGTGCGGAGA ACCTCGTGAG CAAGGTGCTC AAGGACCCCG CGCTGCTCAG CGCGCTCGCG
AAGGCGCCGA AGCCTGCGGC GCAACAGGCG GAAAACCGGG AATCGAAGGA AAAGCACTGA
 
Protein sequence
MAISNSSQKF IARNRAPRVQ IEYDVEIYGS EKKVELPFVM GVLADLSGKP IEPLPAVGDR 
KFFSIDIDNF DERMKAMKPR VAFSVPNTLS GDGQLMVDIT FESMDDFSPA AIAKKVDALS
QLLDARTQLA NLQTYMDGKS GAENLVSKVL KDPALLSALA KAPKPAAQQA ENRESKEKH