| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II0103 |
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| Symbol | |
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| ID | 3845677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007650 |
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| Strand | - |
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| Start bp | 112964 |
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| End bp | 114199 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637837409 |
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| Product | outer membrane porin OpcP |
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| Protein accession | YP_438305 |
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| Protein GI | 83717969 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.660902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGTTGC CTCCGTCCGT GATCGTCAAC GCCGCTTCCG CGTTCCTATA CTTGCGCCGA
TTTTCATCGC AGCCCACACG CAGGAGCCCT TCCGTGAAAA AACCGCTTCT CGCCGGCGCC
ACCGCCGCCG CCCTGTTCGC GCCGCTCGCT CACGCGCAGC GTTCGGTCAC GCTATACGGT
CTGATCGACG CCGGCCTCAT GTACACCAAC AACGCGGGCG GCGCCTCGCA ATGGCGCGCG
ACGAGCGGCA CGATCAACGG CAGCCGCTTC GGCTTGCGCG GCGTCGAGGA TCTCGGCGGC
GGCATCAAGG CGCTGTTCTT GCTCGAGAAC GGCTTCAACG CGAACAACGG CACGCTCGGT
CAGGATGGCA AAATATTCGG CCGCCACGCC TACATGGGAC TGAGCGGCAA CGGCTACGGC
ACGCTGACGC TCGGCCGGCA ATACGACACG ATGGTCGATT TCGTCGCGCC GCTGTCGGCG
AGCGCTGGCG ACTTCGGCGA CACGGACTTC GCCCATCCAT TCGACAACGA CAACCTGAAC
CACTCGCTGC GCATCGATAA CGCGGTGAAA TACACGAGCG ACCATTACGC GGGCGTCAAA
TTTGGCGCGC TGTACGGGTT CTCGAACGCG GCGAACTTCG CCGACAACCG CGCATACAGC
CTCGCCGCGA GCTACGGCAA CGGGCCGCTC AAGCTGGCCG GCGCCTACCT GCAAATCGAC
GGCTCGAAAG GCACGACTGG CGCGAGCCCC GGCGCGGTCG ACGCCGTCGA GGCGAAAGGC
TTGAGCCAGG GCGGCTGGCT GACCGGCTCG AAGCGCATGC GCTCGTATGG CGGCGGCGTC
AACTACACGC TGGGCTCGGC CGTCGTCGGT TTCGTCTATA CCCGCTCACG ATATGACGAT
TCCGGTTCGT TCGGCTCGAC GGGCGAGATC CGCTTCGACA ACTACGAAGC AAACCTCCGC
TATGCGATCA CGCCGGCGTT CGGCGTCGGC GGAGCTTACG TGTACACCGG CGGCCACGTG
TCGGCCTCGG ACAGCAGACA CGACGCGGCC CCGGCGTGGC AGCAGGTCGA CTTGCAGGCC
GTCTACAAGC TGTCGCGCGT CACCGACATC TATGCGGAAG CGATGCATCA GCACGCATCT
GGCCGAGGCT ACCGCGCGTT CATCAACGGC TCCGGCGGCG CATCGGGCAC GCCGAACCAG
ATCGTCTGCA CGGTCGGCAT GCGCACACGC TTCTGA
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| Protein sequence | MELPPSVIVN AASAFLYLRR FSSQPTRRSP SVKKPLLAGA TAAALFAPLA HAQRSVTLYG
LIDAGLMYTN NAGGASQWRA TSGTINGSRF GLRGVEDLGG GIKALFLLEN GFNANNGTLG
QDGKIFGRHA YMGLSGNGYG TLTLGRQYDT MVDFVAPLSA SAGDFGDTDF AHPFDNDNLN
HSLRIDNAVK YTSDHYAGVK FGALYGFSNA ANFADNRAYS LAASYGNGPL KLAGAYLQID
GSKGTTGASP GAVDAVEAKG LSQGGWLTGS KRMRSYGGGV NYTLGSAVVG FVYTRSRYDD
SGSFGSTGEI RFDNYEANLR YAITPAFGVG GAYVYTGGHV SASDSRHDAA PAWQQVDLQA
VYKLSRVTDI YAEAMHQHAS GRGYRAFING SGGASGTPNQ IVCTVGMRTR F
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