Gene BTH_II0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II0048 
Symbol 
ID3844447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp44305 
End bp45702 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content71% 
IMG OID637837354 
Product3-carboxy-cis,cis-muconate cycloisomerase 
Protein accessionYP_438250 
Protein GI83718206 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACAATA AGCGCAATTC GTTTTTTTCG ATCGACCCCA TGCTCGAAGA CAGCGCCCGC 
CTGACCGCTC TCATTTGTGG AAGCGAACCG CTCAACCGGA TCTGGTCGCC TCACGCGACG
CTGCAGCGGA TGCTCGACGT CGAAGCGGCG CTTGCGCGCG CGCTTGCCGC GAACGGCGTG
ATTCCGGCGA GCGCGGTGCA GCCGATCGAG GCGGCGTGCA CGGCCGGCGA GCTCGACGCG
CAAGCGCTGA CGCGCGACGC GGCGCTCGGC GGCAACCTCG CGATTCCGCT CGTCAAGCAA
CTGACCGCGC GCGTGAAGGC GCGCGACGCC GAAGCGGCGA AGTATGTGCA CTGGGGTGCG
ACGAGCCAGG ACATCATCGA TACCGCCGCC GTGCTGCAAC TGCGCGACAC GCTCGACTGG
CTCGATCCGC TGCTGCGCGA TACGTGCGCG ACGCTCGCGA CGCTCGCGGC CGCGCACCGC
GCGACGCCGA TGATCGGCCG CACGTGGCTG CAACAGGCGC TGCCGATCAC GCTCGGATTG
AAGTTCGCGC AGTGGCTCGA CGCGCTGCTT CGTCACCGCG AGCGCATCGC CGCGTTGCGC
GAGCGGGCGC TCGCATTGCA GTTCGGCGGC GCGGCGGGCA CGCTCGCGAG CTTGCGCGGC
GCGGCGCCCG CGGTTGCGCG CGCGCTCGCG GACGATCTTC GGCTCGCGCT GCCGGCCGTG
CCGTGGCATA CGCAGCGCGA CCGGATCGCC GAGACCGCCG CTTGCTTCGG GATGCTGATC
GGTACGCTCG GCAAGATCGC GCGCGACATT TCGCTGTCGA TGCAGACGGA GATCGGCGAA
CTCGCGGAGC CCGCCGCGCC GGGCAAGGGC GGCTCGTCGA CGATGCCGCA CAAGCGCAAT
CCGGTCGGCT GCGCTGCCGT GCTGACCGCT GCCGTGCGCG CGCCGGGACT CGTGTCGACC
GTGTTCGCCG GCATGGTTCA GGAGCACGAG CGCGCGCTCG GCGGCTGGCA AGCCGAGTGG
GACGCATTGC CCGAACTCGC GCGGCTCGCG GGCGGCGCGC TTGCGCAGGT CGCGCAGATC
GCCGGGGGGC TCGATGTCGA CGTCGGGCGC TTGGCCGAAA ACCTCGACGC GACGCACGGC
CTCGTGCTCG GCGAAGCGGT GATGCTCGCG CTCGGCGACA AGGTCGGCCG GCTCGATGCG
CATCATCTCG TCGAGCGTGC ATCGAAGGAA GCCGTGCGCA GCGGCCGTTC GCTGCACGAC
GTGCTGGCCG CGGACCCTGA CGTCGCCGCG CACCTCGCGC CGGATGCGCT GCGGCAGTTG
CTCGACCCCG CTCATTACGT CGGCGAGGCG CACGCCTACG TCGACGCTGT GCTCGCGCTC
CACGCGAGCC GCCATTAA
 
Protein sequence
MDNKRNSFFS IDPMLEDSAR LTALICGSEP LNRIWSPHAT LQRMLDVEAA LARALAANGV 
IPASAVQPIE AACTAGELDA QALTRDAALG GNLAIPLVKQ LTARVKARDA EAAKYVHWGA
TSQDIIDTAA VLQLRDTLDW LDPLLRDTCA TLATLAAAHR ATPMIGRTWL QQALPITLGL
KFAQWLDALL RHRERIAALR ERALALQFGG AAGTLASLRG AAPAVARALA DDLRLALPAV
PWHTQRDRIA ETAACFGMLI GTLGKIARDI SLSMQTEIGE LAEPAAPGKG GSSTMPHKRN
PVGCAAVLTA AVRAPGLVST VFAGMVQEHE RALGGWQAEW DALPELARLA GGALAQVAQI
AGGLDVDVGR LAENLDATHG LVLGEAVMLA LGDKVGRLDA HHLVERASKE AVRSGRSLHD
VLAADPDVAA HLAPDALRQL LDPAHYVGEA HAYVDAVLAL HASRH