| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Moth_2022 |
|---|
| Symbol | |
|---|
| ID | 3831397 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Moorella thermoacetica ATCC 39073 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007644 |
|---|
| Strand | - |
|---|
| Start bp | 2109667 |
|---|
| End bp | 2110812 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637829951 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_430861 |
|---|
| Protein GI | 83590852 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR02634] D-xylose ABC transporter, substrate-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTAAAAA AGAAGGCTAC CAGGATAATT GCCTTGGCTG CAGTTTTAAT CCTGCTGGCT
ATGACCCTTA TAGGTTGCGG TCAAGGCGGA AATTCGAGCA AAAATGGAGG TAATCAGGGC
GCTTCGGCTA AAAATGGCGA TAAGATAAAG ATAGGTCTCT CAATGGATGA TTTACGCCAG
GAACGCTGGC AGCATGATAG AGACTTGTTT GTTGCTAAGG CCAAAGAACT CGGAGCTGAA
GTACTGGTAC AATCAGCAAA CGGTGATGAT GCTACCCAGC TTTCCCAGGC TGAGAACCTC
ATTTCCCAGG GTATTAATGT CTTGGTTGTA ATACCCCATA ATGGAGACGC CATGGCCCCT
ATTGTCGAAG CAGCGCATAA AGCCGGGGTA AAAGTGCTGG CATATGATCG TTTAATAAGA
AATGCAGATG TAGATCTCTA TATTTCCTTT GATAATGTCC GCGTTGGTGA ATTGCAGGCA
GAGTACCTGA CCAAAAAGGT TCCTAAAGGT AAATATTTCC TTATGGGTGG ATCGCCTACA
GACAACAATG CAAAATTATT TAGACAGGGA CAGATGAATG TTCTTAAACC ACTTATTGAT
AAGGGAGACA TTAAGGTTGT TGGCGATCAG TGGGTTAAAG ATTGGCTGCC GGAAGAGGCC
ATGAAGATTA TGGAAAATGC CCTGACTAGC AATAATAACC AGATTGATGC TGTAGTCGCA
TCTAATGACA GTACTGCTGG GGGAGCTATT CAAGCTTTAG CTGCCCAGAA TCTAGCTGGT
AAAGTGGCTA TTTCTGGCCA GGACGCAGAT CTTGCTGCCT GCCAGCGTAT TGTTGAAGGA
ACTCAATCTA TGACTGTTTA TAAACCTATT ACGACTCTGG CTACCCGGGC GGCGGAGGTT
GCGGTGGCGC TGGCCAAGGG TGAAAATATT GGGGCTAATA ATAAAGTAAA TAACGGGAAA
ATAGATGTAC CCTCAGTGTT ACTGACACCC ATTATGGTGG ATAAAGATAA TATGGTCCAG
ACGGTAATTA AAGATGGTTT CCATAAACTT GAAATAAAAA CGTCCCCAAA GAAAAGTGGC
CTAAGCAATA GGCAATCAAT TAATTCAATT AGGCAAGAGG CCACCGTATG GCCTCTTGCC
TGTTAA
|
|---|
| Protein sequence | MLKKKATRII ALAAVLILLA MTLIGCGQGG NSSKNGGNQG ASAKNGDKIK IGLSMDDLRQ
ERWQHDRDLF VAKAKELGAE VLVQSANGDD ATQLSQAENL ISQGINVLVV IPHNGDAMAP
IVEAAHKAGV KVLAYDRLIR NADVDLYISF DNVRVGELQA EYLTKKVPKG KYFLMGGSPT
DNNAKLFRQG QMNVLKPLID KGDIKVVGDQ WVKDWLPEEA MKIMENALTS NNNQIDAVVA
SNDSTAGGAI QALAAQNLAG KVAISGQDAD LAACQRIVEG TQSMTVYKPI TTLATRAAEV
AVALAKGENI GANNKVNNGK IDVPSVLLTP IMVDKDNMVQ TVIKDGFHKL EIKTSPKKSG
LSNRQSINSI RQEATVWPLA C
|
|---|
| |