| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Moth_1910 |
|---|
| Symbol | |
|---|
| ID | 3831183 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Moorella thermoacetica ATCC 39073 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007644 |
|---|
| Strand | - |
|---|
| Start bp | 1978082 |
|---|
| End bp | 1979770 |
|---|
| Gene Length | 1689 bp |
|---|
| Protein Length | 562 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637829843 |
|---|
| Product | sigma-54 dependent trancsriptional regulator |
|---|
| Protein accession | YP_430753 |
|---|
| Protein GI | 83590744 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000822204 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGAGC ATCTGGACTT CTGGGGGGCA ATTCTCGCCG CCCGGCGGCA GGGGATGATT
TATGTTGACG CCGGGGGCCT TATTAAGGTG GCCAATTCCC TGGCGACCGC CATCCTGGGA
TTGGACGGCT GTGATCTCAG GGGCCGCCGC CTGACGGAAG TCTTTCCTGA GACCCGCCTG
GCCGAGGTCC TGACCCGTAA GGGCCCTCTC CTTGGGACCA GCTTTACCGC CGGCAGTAGA
ATCTATCGGG TCGATTATTT CCCCGACGAT GGGGGAGGTG TCGTCCTTCT TTTCAGTGAC
GAGCAGCCTG AGACGAATTC CCTCAAAGCC CTTAACGAAC TCTACGCCTC CCTCCTTGAC
GATTTTCCTC TATACCTGGT GGTCGTCGAC GGCCGGGGGG TGGTGGTCGC CATTAACCAT
TTATATGCCA GCCTCCTGGG TGCAAAGGCC GGTGCCCTGA TCGGCCGGGA AGTAAAGGAT
ATTTTGCCCT TTACCTCCTT GCCGGAGGTC CTATCTTCGG GGATGGCGGT AGCCGGCCGG
GAAGTGGCCT TCCGGGGCAA AAAATTGCTA TTATCGGAAG TGCCGGTTAA AGATGGGGCC
GGGCATCTCC TGGGAGGAGT CGGTAAGGCC CTGGATCTCG AGGACCTGGC AGCCGCCGGT
TTCAGCGACC TCGCCCGCCG CCTGCAGGTC CTGGAGGGCA AGGTTCTTTT CTACCAGCAG
GAACTCCAGT CAATCCAGGG CGACCAGGAC GCCTGGCAGG GCATCCTGGG GGTGAGCCCG
GCTATGGTCC GGCTAAAAAA AATGGCGGCC CGGGTAGCCC GCGGCGAGGC TAACGTTTTG
ATTACCGGCG AGAGCGGTAC CGGGAAGGAA CTGCTGGCCC AGGCCATCCA CCGGGCCAGT
CCTCGCCGGA ATGAACCATT GATCAAGATC AACTGTGCCG CCATCCCGGA AAACCTGCTG
GAGGCCGAAC TCTTCGGCTA CGAAGAGGGG GCCTTTACCG GCGCCGCCCG GGGCGGCAAA
CCGGGCAAGT TTGAACTGGC TGACGGCGGT ACCATCTTCC TGGATGAAGT CGGCGACCTG
CCCCTCAGTA TGCAGCCCAA GCTCCTGCGG GTCCTGCAGG AAAGGGCCTT TGAACGGGTC
GGGGGACGCC GGACCATCAA GGTTGATGTA AGGATTATTG CTGCCACCAA CCAGGATCTC
CTGGCCCTGG AGGCGGCCGG CAAATTTCGC CTTGACCTTT ACTACCGCCT GGCGGTGGTT
ACCCTGACGG TACCACCCTT AAGGGAACGG CCGGGGGACC TCGAAATACT GGTGGCGGCC
ATTATCCGGC GTTTAAATGC ACGCTACCAC CAGACGGTCC GGGGCCTGGA TCCGGAGGTA
CAGCGGCTTT TTTCCCGCTA TAGCTGGCCG GGGAATGTCC GGGAGCTGGA AAATGTCCTG
GAGCATGCCT TTAATTTCCT GGATCCGGGG GAAGAAATAA TTACCTTGAA GCATCTCCCG
GCCACCATGC AAAGGACGAT TGGTGGCGGG GGTGGCCTGA AGCTGAAGAG TGCTGTCGCT
ACGGCGGAAA GGGAAGTTAT CTTAAAGGCC CTCGCGGCCG CTGGTGGAAA CAAACAGGAA
GCGGCCCGTC TCCTGGGTAT TCACCCCTCC GGCCTTTATC AAAAGCTCAA GCGTTATGAT
ATCAATTAG
|
|---|
| Protein sequence | MKEHLDFWGA ILAARRQGMI YVDAGGLIKV ANSLATAILG LDGCDLRGRR LTEVFPETRL
AEVLTRKGPL LGTSFTAGSR IYRVDYFPDD GGGVVLLFSD EQPETNSLKA LNELYASLLD
DFPLYLVVVD GRGVVVAINH LYASLLGAKA GALIGREVKD ILPFTSLPEV LSSGMAVAGR
EVAFRGKKLL LSEVPVKDGA GHLLGGVGKA LDLEDLAAAG FSDLARRLQV LEGKVLFYQQ
ELQSIQGDQD AWQGILGVSP AMVRLKKMAA RVARGEANVL ITGESGTGKE LLAQAIHRAS
PRRNEPLIKI NCAAIPENLL EAELFGYEEG AFTGAARGGK PGKFELADGG TIFLDEVGDL
PLSMQPKLLR VLQERAFERV GGRRTIKVDV RIIAATNQDL LALEAAGKFR LDLYYRLAVV
TLTVPPLRER PGDLEILVAA IIRRLNARYH QTVRGLDPEV QRLFSRYSWP GNVRELENVL
EHAFNFLDPG EEIITLKHLP ATMQRTIGGG GGLKLKSAVA TAEREVILKA LAAAGGNKQE
AARLLGIHPS GLYQKLKRYD IN
|
|---|
| |