Gene Moth_1501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMoth_1501 
Symbol 
ID3831728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMoorella thermoacetica ATCC 39073 
KingdomBacteria 
Replicon accessionNC_007644 
Strand
Start bp1546865 
End bp1547752 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content57% 
IMG OID637829433 
Producttyrosine recombinase XerD subunit 
Protein accessionYP_430353 
Protein GI83590344 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC
[TIGR02225] tyrosine recombinase XerD 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGAGC TGGTGGATCA GTTTCTCTAT TACCTGGTGG TGGAACGGGG TCTGGCCGAA 
AATACCCTGG CTTCCTATAA TAGTGATTTG CAACAGTTTC TTCTCTACCT GGAGGGAGCA
GGTGTCAAAT CGCCCCGGGA TGTGACCCGA GGTTTACTGG TGGCTTACCT GGTGAAAATG
CAGCAGGACG GGCGCTCGCC GGCTACCATT TCCCAGCACC TGGCGGCGCT GAAATCTTTT
TATCATTTCT TGCTGCGGGA GCGCCTGGTG GAAAGCGACC CTACCGCCGA CCTGGAATCA
CCCCGGCAGT CTAAGAAGTT GCCCCAGGTG CTGACGGTGG CTGAAGTCGA AAAGCTTCTT
AACCAGCCGC GCACGGATAC CCCGGCTGGT CTAAGGGATA AAGCCATGCT GGAACTCCTC
TATGCCACCG GCCTGCGGGT ATCCGAACTG GTGTCCCTCA ACGTGGACCA GGTAAACCTG
GAGGGTGAGT TTGTCCGCTG CCTGGGTAAG GGTTCCAAGG AAAGGGTGGT TCCCATGGGC
CAGGTAGCCT GCTTCTATGT CCGGACATAC ATAGAAAACG GCCGGGGGAA ACTAATTAAA
AGAGCAACGG AACCGGCCCT GTTTGTCAAT CACCACGGCC GCCGCCTCTC CCGCCAGGGC
TGCTGGAAGA TCCTCAAGGG TTATGTGCGG GCGGCCAACC TGAAAAAGGA CATAACGCCC
CATACCCTGC GCCACTCTTT TGCCACCCAT CTGCTGGAAA ACGGCGCCGA CCTGCGTTCG
GTGCAGGAAC TCCTGGGGCA CGCAGATATA GGTACGACCC AGATCTATAC CCACCTGACC
CGGAAGAAAA TCCGGGAGAT TTATGATCAC ACCCACCCGC GGGCGTAA
 
Protein sequence
MHELVDQFLY YLVVERGLAE NTLASYNSDL QQFLLYLEGA GVKSPRDVTR GLLVAYLVKM 
QQDGRSPATI SQHLAALKSF YHFLLRERLV ESDPTADLES PRQSKKLPQV LTVAEVEKLL
NQPRTDTPAG LRDKAMLELL YATGLRVSEL VSLNVDQVNL EGEFVRCLGK GSKERVVPMG
QVACFYVRTY IENGRGKLIK RATEPALFVN HHGRRLSRQG CWKILKGYVR AANLKKDITP
HTLRHSFATH LLENGADLRS VQELLGHADI GTTQIYTHLT RKKIREIYDH THPRA