Gene Moth_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMoth_1352 
Symbol 
ID3831910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMoorella thermoacetica ATCC 39073 
KingdomBacteria 
Replicon accessionNC_007644 
Strand
Start bp1398101 
End bp1398823 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content60% 
IMG OID637829288 
Productribosomal large subunit pseudouridine synthase B 
Protein accessionYP_430208 
Protein GI83590199 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.92415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTTGC AGAAGTACCT GGCCCTGGCC GGGGTGGCTT CCCGGCGCCG GGCCGAAGAC 
CTTATCCGTG CCGGGCGGGT GCGGGTAAAC GGCCGGGTCA TAAAAGTTAT GGGTGTCCAG
GTGGAACCGG GGCAGGATAA AGTGACTGTC GACGGCCAGC CTGTGACCGG GCCGGAGAGA
AAGTATTACC TTCTCCTGTT TAAACCGGCC GGTTATGTAA CTACCGTCTC CGATCCCCGG
GGACGGCCCA AGGTCACTGA CCTGGTGCAC GGCATACCTG CTAGATTATA TCCCGTGGGC
CGCCTGGATT ATGCCACCGA GGGTCTTCTC TTGCTAACCA ACGACGGCGA GCTAACCCTG
CGCCTGACCC ACCCCAGATA CGGGGTAACG AAGACCTACC TGGCTCTGGT CAGGGGTATA
CCCGATGCTA ATACTATCCA GCATTTACGC TGCGGTGTCA AGCTGGAAGA CGGCCCTACA
GCTCCTGCGA GGGTAAATTT GTGCCGGGCG GGGAAAGATA GCGCCCTCCT GGAATTAACC
CTCAGGGAAG GCCGGAACCG GGAGGTGCGA CGTATGCTGG CGGCGGTCGG TCACCCGGTC
CTGCGCCTCC GGCGGATCCG CCTGGCCTTT TTAACCCTTC GAGGTTTAAA ACCCGGCACC
TATCGCCACC TCACCCCCCA CGAAGTCGAA CGATTGTACC GGCTGGTAGG TTTAAAAAAA
TAG
 
Protein sequence
MRLQKYLALA GVASRRRAED LIRAGRVRVN GRVIKVMGVQ VEPGQDKVTV DGQPVTGPER 
KYYLLLFKPA GYVTTVSDPR GRPKVTDLVH GIPARLYPVG RLDYATEGLL LLTNDGELTL
RLTHPRYGVT KTYLALVRGI PDANTIQHLR CGVKLEDGPT APARVNLCRA GKDSALLELT
LREGRNREVR RMLAAVGHPV LRLRRIRLAF LTLRGLKPGT YRHLTPHEVE RLYRLVGLKK