Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Moth_1352 |
Symbol | |
ID | 3831910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Moorella thermoacetica ATCC 39073 |
Kingdom | Bacteria |
Replicon accession | NC_007644 |
Strand | - |
Start bp | 1398101 |
End bp | 1398823 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637829288 |
Product | ribosomal large subunit pseudouridine synthase B |
Protein accession | YP_430208 |
Protein GI | 83590199 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.92415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTTGC AGAAGTACCT GGCCCTGGCC GGGGTGGCTT CCCGGCGCCG GGCCGAAGAC CTTATCCGTG CCGGGCGGGT GCGGGTAAAC GGCCGGGTCA TAAAAGTTAT GGGTGTCCAG GTGGAACCGG GGCAGGATAA AGTGACTGTC GACGGCCAGC CTGTGACCGG GCCGGAGAGA AAGTATTACC TTCTCCTGTT TAAACCGGCC GGTTATGTAA CTACCGTCTC CGATCCCCGG GGACGGCCCA AGGTCACTGA CCTGGTGCAC GGCATACCTG CTAGATTATA TCCCGTGGGC CGCCTGGATT ATGCCACCGA GGGTCTTCTC TTGCTAACCA ACGACGGCGA GCTAACCCTG CGCCTGACCC ACCCCAGATA CGGGGTAACG AAGACCTACC TGGCTCTGGT CAGGGGTATA CCCGATGCTA ATACTATCCA GCATTTACGC TGCGGTGTCA AGCTGGAAGA CGGCCCTACA GCTCCTGCGA GGGTAAATTT GTGCCGGGCG GGGAAAGATA GCGCCCTCCT GGAATTAACC CTCAGGGAAG GCCGGAACCG GGAGGTGCGA CGTATGCTGG CGGCGGTCGG TCACCCGGTC CTGCGCCTCC GGCGGATCCG CCTGGCCTTT TTAACCCTTC GAGGTTTAAA ACCCGGCACC TATCGCCACC TCACCCCCCA CGAAGTCGAA CGATTGTACC GGCTGGTAGG TTTAAAAAAA TAG
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Protein sequence | MRLQKYLALA GVASRRRAED LIRAGRVRVN GRVIKVMGVQ VEPGQDKVTV DGQPVTGPER KYYLLLFKPA GYVTTVSDPR GRPKVTDLVH GIPARLYPVG RLDYATEGLL LLTNDGELTL RLTHPRYGVT KTYLALVRGI PDANTIQHLR CGVKLEDGPT APARVNLCRA GKDSALLELT LREGRNREVR RMLAAVGHPV LRLRRIRLAF LTLRGLKPGT YRHLTPHEVE RLYRLVGLKK
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