| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Moth_1053 |
|---|
| Symbol | |
|---|
| ID | 3831859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Moorella thermoacetica ATCC 39073 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007644 |
|---|
| Strand | + |
|---|
| Start bp | 1083752 |
|---|
| End bp | 1084669 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637828981 |
|---|
| Product | tRNA pseudouridine synthase B |
|---|
| Protein accession | YP_429910 |
|---|
| Protein GI | 83589901 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0130] Pseudouridine synthase |
|---|
| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000000253025 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.00000016309 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTTATGG GTTTTGTTAA TGTCTTAAAA CCGCCGGGAC TTACCTCCCA TGACGTGGTG
CAGAATCTGC GCCGGCTTCT CAAAGTCAAG AGGATCGGCC ATGGTGGCAC CCTGGACCCT
CTGGCGGCTG GCGTCCTGCC GGTTGCCGTT GGTACGGCTA CCCGTTTGCT GGAATACCTG
CAGGGCGGCG ATAAAGCCTA CCGGGCCGAG TTTATCCTGG GCCTGAAGAC CGACACCCAG
GACTTGGGCG GCCGGGTCCT GGCCAGGAAA CCCTGCCCGC CTTTCACAGA AAAGGATTTA
CAGGCCGCCA CCAGGCCCTT TACGGGGACT ATCAGGCAGG TACCACCCAT GGTATCGGCT
GTGCACTACC AGGGCCGCCG GCTTTATGAA CTGGCAAGGG AGGGCCTGGA GGTTGAACGA
CCGGCCCGCC AGGTGACCAT CCATGAATTT CGGCTGATTA GGGCCTGGCC TGATGGACCT
TACTACCGGG CGTTAATAGA TATCACCTGC TCCCGGGGTA CCTATATCCG TACCCTGGGG
GCTGACTGGG GTGATTACCT GGGGGTAGGT GCCACCCTGG CCTTTTTACT TCGTACCCGA
GCCGGGAGTT TCCGATTGAC AGATGCCTGG ACCCTGGAGG AAATAGCCGG GGCTATAGAT
AGGGGCGAGA GGACCTTCCT TCTCCCGCCC GCCGCCGGCC TGGCCCACCT GCCAGTGATA
ATAGTTCCAG GCGAGTTTAT CCGCCATGTA AGTAACGGGG TAGCCATCAA GGGTGATGTA
TGCCGGCCGC TACCGTCCCT CAGAGAAGGG GATATAGTGC GCCTGGAGAC CGGCGAAGGC
CAACTCCTGG CCCTGGCCAG GGTGGAGCCA GATACCAGGG GGTCCTTCTT ACTAAAACCC
CATAAGGTTT TGAAGTGA
|
|---|
| Protein sequence | MVMGFVNVLK PPGLTSHDVV QNLRRLLKVK RIGHGGTLDP LAAGVLPVAV GTATRLLEYL
QGGDKAYRAE FILGLKTDTQ DLGGRVLARK PCPPFTEKDL QAATRPFTGT IRQVPPMVSA
VHYQGRRLYE LAREGLEVER PARQVTIHEF RLIRAWPDGP YYRALIDITC SRGTYIRTLG
ADWGDYLGVG ATLAFLLRTR AGSFRLTDAW TLEEIAGAID RGERTFLLPP AAGLAHLPVI
IVPGEFIRHV SNGVAIKGDV CRPLPSLREG DIVRLETGEG QLLALARVEP DTRGSFLLKP
HKVLK
|
|---|
| |