| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Moth_1007 |
|---|
| Symbol | |
|---|
| ID | 3833310 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Moorella thermoacetica ATCC 39073 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007644 |
|---|
| Strand | - |
|---|
| Start bp | 1035657 |
|---|
| End bp | 1036706 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637828936 |
|---|
| Product | 2-hydroxyglutaryl-CoA dehydratase, D-component |
|---|
| Protein accession | YP_429865 |
|---|
| Protein GI | 83589856 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1775] Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000000530359 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000167288 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCATT TAGTGGGTTG GCTGTGCCAC TATACGCCGG TAGAAATTTT TACGGCTCTC
GGGTACACCC CTTACCGGCT GCTGGGCCGG GAGGGCAATA ACCCCCGCGC CGCTACATAT
CTGGTGGGCA ACCTCTGCCC TTATGTCCAG AGCTGCCTCG AGGCAGCCAT CAAACAGGAG
TTACCCCTCC TGGCCGGCGT CGTAATCGCC CGATCTTGCA ATGCCATGAT CCACCTGGCT
AATGTCTGGC CCCATTATGG TGCAGGGGGT AAGACCGTAG TCCTCGATGT ACCCCGCCGG
TTCGACGAGG ACGCAGTTTT CTATTTCAGC CAGAATCTAC GCCGTCTGGC GGCAGAACTA
GCTCCCCCTG GGGAGCGACA ATTAAATGAA GAACGTTTGT GGGCGGCCAT TACCTGGTGG
GAAGAACAAC GGGCAGCCTG GCGCGAGCTT TTAGCCTGCC GGGCTGCGTG GGAAGACCCT
CCCGGCGGGA AAGAAATCAT GGACGGGCTG GCCAGGTGGC AAACTCCCCT TAATCCCCAG
GAGGCAGATA AATGGGAGAC TGTAATTACT CGGTTAACCA GGCAACCCCG GGTGAAAACC
GCCCGGCGGC CGCGCCTGCT GCTAGCGGGA AGCATCCTCC CGCGGGAATT GATTACTATG
GTGGAAGAGT GCGGCGGTTT ATCTGTTTTC GAGGACAGCT GCAATGGCAT GCGGCTATTA
CTGGCCCCCG CCGCCAGGGC CGAGGGTGAC CCTTACCTCT ACCTGGCCAG GCTCTACCTG
GGAGGACCCC CATGTCCCCG GATGGTAGGC GACCGGGAGA AACGACGCCA GTACTGGGCC
GCAGCTGTAG ACCGGTTCCG TATCCAGGGA ATCATTTACC ATGCCATGAA GTTCTGCGAC
GCCGCTATGT ACGACTACAT AGCCCTGAAG GTTTTTAGTG AAAAAAAGGG GTTACCCCTT
CTTCGTCTTG ATGGGGATTT CAGCGGCGGT AATCGGGGTC AATGGCAGAC GCGGCTGGAA
GCCTTTTTAG AAATGCTAGG GGTGGAGTAA
|
|---|
| Protein sequence | MSHLVGWLCH YTPVEIFTAL GYTPYRLLGR EGNNPRAATY LVGNLCPYVQ SCLEAAIKQE
LPLLAGVVIA RSCNAMIHLA NVWPHYGAGG KTVVLDVPRR FDEDAVFYFS QNLRRLAAEL
APPGERQLNE ERLWAAITWW EEQRAAWREL LACRAAWEDP PGGKEIMDGL ARWQTPLNPQ
EADKWETVIT RLTRQPRVKT ARRPRLLLAG SILPRELITM VEECGGLSVF EDSCNGMRLL
LAPAARAEGD PYLYLARLYL GGPPCPRMVG DREKRRQYWA AAVDRFRIQG IIYHAMKFCD
AAMYDYIALK VFSEKKGLPL LRLDGDFSGG NRGQWQTRLE AFLEMLGVE
|
|---|
| |