Gene Rru_A3790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3790 
Symbol 
ID3837247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp4340984 
End bp4341970 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content65% 
IMG OID637827915 
Productglycolate reductase 
Protein accessionYP_428871 
Protein GI83595119 
COG category[R] General function prediction only
[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCAGG CCAAGCCTCT GGTCATCGTT ACGCGTAAGT TGCCCGAAGC CATCGAAACC 
CGCATGGCGG AGCTGTTCGA TGCCCGGCTG AACGTCGATG ACCATCCGTT CACCCGGGAA
GAACTCTGCC AGGCCGTGGC GGAGGCCGAT GTGCTGGTTC CCACGGTGAC CGACCGCATC
GATGGCGGCG TGCTGTCCCA TTGCGGGGAG TCGCTGCGGC TGATCGCCAA TTTCGGCACC
GGCATCGACC ATATCGACGT GGCCACCGCC CATCAGCGCG GCGTCACCGT CACCAATACC
CCCGACGTTC TGACCGAAGA CACCGCCGAT ATGACGATGG CGATGATCCT GGCCGTGCCG
CGTCGGCTGG CCGAGGGCGA GCGCATGGTG CGCGAGGGCC AGTGGCTGGG CTGGAGCCCG
ACCCATATGC TGGGCCACCG CATCTGGGGC AAGCGCCTGG GCATCATCGG CATGGGGCGG
ATCGGCCGCG CCGTCGCCCG GCGCGCCCGG GGCTTTGGCA TGACCATCCA TTACCACAAC
CGCCGCCGGC TGCACGAAAG CCTGGAACAG GAACTCGACG CCACCTATTG GGAAAGCCTC
GATCAGATGC TGGCGCGGAT GGACGTGGTC TCGATCCACT GTCCCCATAC CCCGGCCTCC
TATCATCTGT TGTCGGCCCG GCGCTTGGCG CTGCTGCGGC CCGAGGCCTA TGTGGTCAAT
ACGGCGCGCG GCGAGGTGAT CGACGAGAAC GCCCTGGTGC GCATGCTGGC GAAGGGGGAC
CTGGCCGGTG CGGCCCTTGA CGTCTTCGAA TACGAACCCG CCGTCAATCC CAAGCTGGTC
GCCATGAACA ACGTCTTGCT GCTCCCCCAC ATGGGCTCGG CGACGCTGGA GGGGCGGATC
GACATGGGCG AGAAGGTTCT GATCAACATC AAGACCTTCG TCGATGGTCA CAAGCCTCCC
GACCGGGTTC TGCCCACCAT GCTCTGA
 
Protein sequence
MPQAKPLVIV TRKLPEAIET RMAELFDARL NVDDHPFTRE ELCQAVAEAD VLVPTVTDRI 
DGGVLSHCGE SLRLIANFGT GIDHIDVATA HQRGVTVTNT PDVLTEDTAD MTMAMILAVP
RRLAEGERMV REGQWLGWSP THMLGHRIWG KRLGIIGMGR IGRAVARRAR GFGMTIHYHN
RRRLHESLEQ ELDATYWESL DQMLARMDVV SIHCPHTPAS YHLLSARRLA LLRPEAYVVN
TARGEVIDEN ALVRMLAKGD LAGAALDVFE YEPAVNPKLV AMNNVLLLPH MGSATLEGRI
DMGEKVLINI KTFVDGHKPP DRVLPTML