Gene Rru_A3789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3789 
Symbol 
ID3837246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp4340128 
End bp4340688 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content66% 
IMG OID637827914 
Producthypothetical protein 
Protein accessionYP_428870 
Protein GI83595118 
COG category[S] Function unknown 
COG ID[COG3807] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTTC GCAAGCCCTT TTCCCTCCCG GCCCTCGTCG CGACGATGGT TGCCCTGGCC 
CTGGTCGTGG CGACTCCGCC GACCAAAGCC CAGGTCGCCC CCGAAGCCGA CGAAAACGCC
GGGTCGGGGG GCGAGGCGCC CAGCGGCCTG CCGCTTCCCC GATTCGCCTC GTTGCGGTCG
GCTCAAATCA ATATGCGCTC GGGTCCGGGC ACCCGTTATC CGGTGGTCTG GACCTTTCAG
AAGCGCGGAA TTCCCATAGA GATCCTGGCC GAATACGACA ATTGGCGCAA GATCCGCGAT
CCCGAGGGGT CGGAGGGGTG GGTTCACCGT CACATGCTCT CGGGCGAGCG CACGTTTCTC
ACCATCGGCG GCCCGCAGAT TCTGCGCAGC GACCCTTCGG TGGAAAGCAG GCCTCTGGCC
CGTCTGGAGC CGGGCGTGAT CGGTAAATTG CTGACATGCC CCAGGGCGAC CGCCTATTGC
CGGGCCGATG TCGGGGGCTA TCTGGGCTGG TTGGCGCGCG ATGCCTTCTG GGGGCTCTAT
CGCGACGAAA CCCTGGATTA G
 
Protein sequence
MTLRKPFSLP ALVATMVALA LVVATPPTKA QVAPEADENA GSGGEAPSGL PLPRFASLRS 
AQINMRSGPG TRYPVVWTFQ KRGIPIEILA EYDNWRKIRD PEGSEGWVHR HMLSGERTFL
TIGGPQILRS DPSVESRPLA RLEPGVIGKL LTCPRATAYC RADVGGYLGW LARDAFWGLY
RDETLD