| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3788 |
|---|
| Symbol | |
|---|
| ID | 3837245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 4339496 |
|---|
| End bp | 4339909 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637827913 |
|---|
| Product | ferric uptake regulator family protein |
|---|
| Protein accession | YP_428869 |
|---|
| Protein GI | 83595117 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0735] Fe2+/Zn2+ uptake regulation proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCATC ATCGTCCGTT CAGGCCTATC CTGGAAAAAT TAAGAAAAGC GGGTCTGCGC
CCGACGCGTC AGCGTCTGGC CTTGGCCCGG TTAATGTTCG ATGCCGGAAA CCGTCATGTG
ACGGCTGAAA CCCTGCATAC CGAAGCGATG GATGCGGGCG TTTCCGTATC TCTGGCTACC
GTCTACAATA CGTTGCATCA ATTCACAGAA GGTGGACTTT TGCGCGAAGT GGTCGTTGAC
CCCGGCCGCT CCTATTTCGA TACCAATACC TCCGAGCACT ATCACTTCTA CTTCGAGGTT
TCGGGGGAGC TGGTGGATAT TCCGGCCTCC GACGTCAACA TCGACCGCCT GCCCGAGATC
CCGGCCGGCG CCAATGTTCG CGTCATCGAT TTGGTTATTC GCCTGGGTGT CTGA
|
|---|
| Protein sequence | MNHHRPFRPI LEKLRKAGLR PTRQRLALAR LMFDAGNRHV TAETLHTEAM DAGVSVSLAT
VYNTLHQFTE GGLLREVVVD PGRSYFDTNT SEHYHFYFEV SGELVDIPAS DVNIDRLPEI
PAGANVRVID LVIRLGV
|
|---|
| |