| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3786 |
|---|
| Symbol | |
|---|
| ID | 3837243 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 4337009 |
|---|
| End bp | 4337884 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637827911 |
|---|
| Product | glycerophosphodiester phosphodiesterase |
|---|
| Protein accession | YP_428867 |
|---|
| Protein GI | 83595115 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACC GCTCTCAGAC CGATCGTCCC GGTCTTTCTG GGACTCCTTC TCCCGCCTCT
GGTGGCATCG CCTACCCCCC TGTGCCCGAC CGTCTGATCG GGCACAGGGG AGCCGCCGCT
TCGGCGCCGG AAAACACCCT GGCCAGTTTC CAGGCCGCCG CGGCGGCCGG AGCGCGCTGG
GTTGAATTCG ACGTCAAGCT GACGGCCGAA GGCGTGCCGA TCGTCCTTCA TGACGACACG
CTTGATCGTA CGACCAACGG GCAGGGGCCG GTTGCCGCCC TCTGTCTGGC CGATCTCAAG
GACCTCGACG CCGGAAGCTG GTTTTCAGCC GACTTCGCCG GAGAACGGGT GCCGACCCTG
GCGGAAACCC TCGACACCCT TGCGGTGCTC GGGCTGGGAG CCAATATCGA ACTCAAGCCC
TGCCCCGGAC GGACCGCCGA AACGGCGCGG GCCGCCCTGG CCGTCGCCCA AAGGCGCTGG
CCCCAGGCCG CGCCGCCCTT GGTGATTTCC AGTTTCGATC TGGACGCCTT GGCCGAAGCG
GCGGCGATCG CCGCCCAGGG GGTGATGACG CCCTGGCCGC GCGCCCTGCT GGCCGATGCC
GCCGATGGCT GGACCGCCGC CCTGTTGATC GAACGCGCCC GCGCTCTTGG CTGCGTCGGC
GTTCATTTGG ACGATGCGCT CGCCTCGGCC GAAACGCTGG AAACCCTGCG GGCGGCGGGC
CTGCGCCGCG CCGTCTGGAC GGTGAATGAC CGGTCGCGCG CCCTGGCCTT GTGGGAACAA
GGTGCGGATG CCATTATTAC CGACCGACCG GCAAGTTTGC TGGATAAAGG GGACAAAAAG
GCAGGGGACG ATCCCGTGGG ACCGACGGGC CGGTGA
|
|---|
| Protein sequence | MSDRSQTDRP GLSGTPSPAS GGIAYPPVPD RLIGHRGAAA SAPENTLASF QAAAAAGARW
VEFDVKLTAE GVPIVLHDDT LDRTTNGQGP VAALCLADLK DLDAGSWFSA DFAGERVPTL
AETLDTLAVL GLGANIELKP CPGRTAETAR AALAVAQRRW PQAAPPLVIS SFDLDALAEA
AAIAAQGVMT PWPRALLADA ADGWTAALLI ERARALGCVG VHLDDALASA ETLETLRAAG
LRRAVWTVND RSRALALWEQ GADAIITDRP ASLLDKGDKK AGDDPVGPTG R
|
|---|
| |