Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3783 |
Symbol | truB |
ID | 3837240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 4333312 |
End bp | 4334238 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637827908 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_428864 |
Protein GI | 83595112 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0711171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCGGC GCCGGCGCGG TCAGGCGATC CACGGCTGGC TTGCCATCGA CAAGCCCGTC GGCATCACCA GCACCGATGT GGTCAACCGG CTGCGGCGGA CGATGGACGC GGCCAAGGTC GGCCATGGCG GCACCCTTGA TCCGTTGGCC AGCGGCGTTC TGCCCATCGC CTTTGGCGAG GCGACCAAGA CCGTGTCCTA TGTGATGGAC GGCACCAAGG TCTATCACAT GGTCGTCGGC TGGGGTGAAG CCCGCGATAC CGACGATCGC GAAGGCAAGG TCATCGACAC CAGCGATGTC CGTCCCGATG CCCAGGCGAT CACCGCCATG CTGGCGCGCT TCACCGGCGA GATCGAACAG GTGCCGCCGA TCTATTCGGC CGTCAAGGTC GAGGGGCGGC GCTCCTATGA TCTGGCGCGC GCCGATCAGG CCGTGGAATT GAAGTCGCGC AAGATCCTGA TCAAGGATCT GACGCTTCTC GAGACCTCGA CCCCGGATTT TGGCCATTTC CGCATCGTTT CGGGCAAGGG CGCCTATATG CGCTCGCTGG CCCGCGACCT GGCCTTGGCC CTGGGAACGG TCGGCCATGT CGTCGCCCTG CGTCGTCTCG CATGCGGTCC GTTCACCGCC GAAACGGCGA TTTCTCTGGA TATGGTAGAC GCCCTCGGGC ATGATGCGCC CCATTCTGAA AGCCTGCTTC CCATCGAGGC CGCGCTGGCC GACATCCCGG CCGTGCCTTT GACGGAAGCG GAGGCCCGTC GCCTGTCCCA AGGACAGCCC GTGTCCCTCT TGCATCTGGC AAGCCGGACC CCCCTGAACG GACTCGCCCA AGGCGAAACC GTTCAGGCGC TGCTCAATGG AAAACTGGTG GCTTTGGCAA AAATCGTAGA GGGCGAAATC CGCCCCTTGC GCGTCGTCAA CCTCTAG
|
Protein sequence | MSRRRRGQAI HGWLAIDKPV GITSTDVVNR LRRTMDAAKV GHGGTLDPLA SGVLPIAFGE ATKTVSYVMD GTKVYHMVVG WGEARDTDDR EGKVIDTSDV RPDAQAITAM LARFTGEIEQ VPPIYSAVKV EGRRSYDLAR ADQAVELKSR KILIKDLTLL ETSTPDFGHF RIVSGKGAYM RSLARDLALA LGTVGHVVAL RRLACGPFTA ETAISLDMVD ALGHDAPHSE SLLPIEAALA DIPAVPLTEA EARRLSQGQP VSLLHLASRT PLNGLAQGET VQALLNGKLV ALAKIVEGEI RPLRVVNL
|
| |