Gene Rru_A3740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3740 
Symbol 
ID3837197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp4290807 
End bp4291373 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content66% 
IMG OID637827865 
Productshikimate kinase 
Protein accessionYP_428821 
Protein GI83595069 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.695476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAG CCGAGGAAAA CACCCTGGCA CTGCCGCGCA CCCTGGTTCT GGTCGGGCTG 
ATGGGGGCGG GCAAAACCTG TATCGGCCGC CGTCTGGCCC AGATGGCCGG GGTGCCGTTC 
GTCGATGCCG ATGTCGAGAT CGAGCGCGCC GCCAAACGCA CCATCGCCGA GATCTTCGCC 
ACCTATGGCG AAAGCGAATT CCGCGCCCTG GAGCGGCGGG TGATGGCCCG GTTGCTGGCG 
GGGCGCACCT GCGTGCTGGC CACCGGCGGC GGCGCCTTCA TGGCCGAAGA CACCCGCGCC 
CTAATCCGCC TTCACGGGTT ATCCTTGTGG CTGCGCGCCG ATCTTGATCT TCTGGTCGCC 
CGCACCGCCG GACGAACCCA CCGGCCGCTG CTCAATAACG GCGACGCGCG CGAAAAACTG 
GCCGAGCTGA TGGCCAAGCG TCATCCTGTC TATGCCGAGG CCGATATCGT TTTCGATGCC 
CTTGACGAAA GCCAGGACGC CTCCGCCCTG CGGGTGCGCT CGTGCCTTCT TTCCTACCTC 
GCCGACCATG CGGAGACCGC CCCGTGA
 
Protein sequence
MIEAEENTLA LPRTLVLVGL MGAGKTCIGR RLAQMAGVPF VDADVEIERA AKRTIAEIFA 
TYGESEFRAL ERRVMARLLA GRTCVLATGG GAFMAEDTRA LIRLHGLSLW LRADLDLLVA 
RTAGRTHRPL LNNGDAREKL AELMAKRHPV YAEADIVFDA LDESQDASAL RVRSCLLSYL 
ADHAETAP