| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3706 |
|---|
| Symbol | |
|---|
| ID | 3837162 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 4255970 |
|---|
| End bp | 4257352 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637827830 |
|---|
| Product | aminotransferase |
|---|
| Protein accession | YP_428787 |
|---|
| Protein GI | 83595035 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTTCG CCGCCGGATT TGTCCAGGGA GTCCGCCCTT TTTGGCCAAA GGGATCGCCC
ACCGATGGCA CCGGAGCTTG CCCCTTTCCG GGTGGCCGCG TACTCTTTCG GCCACACCCC
CCGGGGAGGG CCCGTCCCTT GTTCGGGGTC TCGCGCCCCC GATCCGTAGC GGACCACCCC
ATGATCAATC CCCGGCTCAT CGCCCTGCCC GATTATCCGT TCCAGCGTCT GGCCACCTTG
CTGGCCGGGG TCGCCCCCGG AGCCGATCCC CTGGCGCTGT CGGTGGGCGA GCCCCAACAC
CCGACCCCGG CGCTGGCCGG CCTGGAACTG GCCCGTCACG GCGACCAATG GCGGCGCTAT
CCGCCCGCCG CCGGCAATGA GCGCTGGAAG GCGGCGGTCA CCGCTTGGCT GACCCGGCGC
TATGGCCTGC CCGCCGCGAT GATCGATCCG CACGCGGTGA TCCCGGCCTC GGGCACCCGC
GAGGCGTTGT ACATGCTGGG CCAGGTGCTG ACCGATGGCC GGGGCGAGGC TGGCGAGCGG
CCGCTCGTGG TCATGCCCGA TCCGCTTTAT CTGCCCTATC TGGGCGCGGC CAGGATGAAC
GGCGCGACCA TTCTGGCCGT TCCCGGGTCG GAAGAGGGGG ATTTCCTGCC CGATATCGCC
GGCCTGCCCG CCGCCACCCT GGAGCGCGCC GCCGCCGTCT TCGTTTGCTC GCCGGCCAAT
CCGCAAGGCT CGATCGTCAG CCTGGAGTCG TGGAAAACCC TGGTCGGGCT GGCGCGCCGC
CACGGCTTCG TGCTGGTCGC CGATGAATGC TATAGCGAGA TCTACGACGA CCAGCCGCCG
CCCGGCGTCC TTGAGGCCTG CCGCGACCTT GGCGGGTCGC TGAAGAACGT GCTGGTGCTT
AACAGCCTGT CGAAGCGCTC CAATGGCGCC GGGCTGCGCT CGGGGTTGAT CGCCGGCGAT
CGGGCGCTGA TCGACGCCTT CTTGCGCCTG CGCGCCTACG CCTCGGCGGG GATGCCCTTG
CCGATCATGG AGGCCAGCGC CGCCCTGTGG GACGACGAGA CCCATGTCGA GGCCAACCGC
GCCCTCTATC GCGAGAAGAT CGATCTGGCC GCGGCGCGGC TGAAGGGCAT GCTGGGGTTT
CGCCGGCCGC CCGGCGGGTT CTTCCTGTGG CTGGACACCA CGCCGTGGGG CGAGACCGGC
GAGCAGGCGA CGCTGCGGCT GTGGCGTGAC CATGGACTGA AGGTGCTGCC CGGCGCCTAT
ATGACCGCCA ATCCCGATGC CGGCGACAAT CCCGCCCGCA ACCGGCTGCG GCTGGCCCTG
GTCCATGACG GCCCGGTGGT CGCCCGGGCC CTGGACCGGC TGGTCGCGGC AAGCCCCCAC
TGA
|
|---|
| Protein sequence | MAFAAGFVQG VRPFWPKGSP TDGTGACPFP GGRVLFRPHP PGRARPLFGV SRPRSVADHP
MINPRLIALP DYPFQRLATL LAGVAPGADP LALSVGEPQH PTPALAGLEL ARHGDQWRRY
PPAAGNERWK AAVTAWLTRR YGLPAAMIDP HAVIPASGTR EALYMLGQVL TDGRGEAGER
PLVVMPDPLY LPYLGAARMN GATILAVPGS EEGDFLPDIA GLPAATLERA AAVFVCSPAN
PQGSIVSLES WKTLVGLARR HGFVLVADEC YSEIYDDQPP PGVLEACRDL GGSLKNVLVL
NSLSKRSNGA GLRSGLIAGD RALIDAFLRL RAYASAGMPL PIMEASAALW DDETHVEANR
ALYREKIDLA AARLKGMLGF RRPPGGFFLW LDTTPWGETG EQATLRLWRD HGLKVLPGAY
MTANPDAGDN PARNRLRLAL VHDGPVVARA LDRLVAASPH
|
|---|
| |