| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3700 |
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| Symbol | |
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| ID | 3837156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 4248630 |
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| End bp | 4249775 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637827824 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_428781 |
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| Protein GI | 83595029 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA AACGTCTGGC GATCATGCTG GTGGGCAGCG TCGTCCTGTT TGGCGGCGTG
ATCGGCTTTA CGGTCTTTCG CGATCACATG ATCGCCCAGT ATTTCGCCAA CCAACCCGAA
CCGGTGATCA CCGTCACCGT CGAGGACGCG CGCGCCGAAG ACTGGCAAGA CACCATCCCC
GCCGTGGGCA CGCTGCGCGC CATCAACGGC GTGACGGTGG GGGCGGCCGT GGCCGGCATC
GTCGAGACGA TTTCGTTTGA GTCGGGGCAG CGGGTGAAAA AGGGCGATCT GCTGGTCCGC
CTGGATGACG GCGAGGAGCG CGGCGAGCTT GACGCCGTGC GCGCCCAGGC CGAACTGTCG
CGCATCACCG CCGGCCGCGC CCGCCGACTG GTGCAATCGG CCGCCGGAAC CCGGGCCAAT
CTGGACGACG CCGAGGCGCA GTTGCGGGTT AATCTGGCCA CCATCGGCCA ACTCGAGGCC
CGCGTCGCCA AAAAGACCGT GACGGCGCCG TTTGATGGCG TGCTTGGCGT GCGCGCGGTC
GATCTGGGCG AATACGTCAC CGCCGGCCAG ACCCTGGTCG ACCTTCAGGA CCTGTCGGTG
ATCCTCGCCG ATTTCTCGGT TTCCCAAAAA GACCTGGGCC GGGTGGCCGT TGGCGCCAAG
CTGACGCTGA CCACCGACGC CTGGCCCGGG CGCGCCTTCG AAGGCACCAT CAAGGCTATC
GCCCCCAAGG TCGACGCCAA TACGGGCATG GCCGTGGTCG AAGGCCGCTT CGACAACCCC
GATGGCGCCC TGCGCCCGGG CATGTTCGCC AAGCTGGCCG TGCTGCGCGC CGAACGCCAG
AGCGTGGTGA CGGTTCCGGC CACCGCCGTG ACCTACAGCC TGCATGGCGA CGCCCTTTAT
GTGCTGAAGG AGGCCGGCGA AGACGGCAAG GTCCGCGTCG ACCGCATCAC CGTCACCACC
GGCGTGCGCC GGGGCGACCG GGTGGTCGTG ACCGCGGGCT TGAGCGCCGG CCAGCGGGTC
GTCACCTCCG GTCAGGTCAA GCTCAACGAC GGCAGCGCCG TGGCCGTCGC CCAGGCGCCC
CTGAACACCG CCGCCCGCGC CGAAAGCGGC GCCAAGGGTG ACTCGACCAA GGACACCCTG
CGATGA
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| Protein sequence | MKKKRLAIML VGSVVLFGGV IGFTVFRDHM IAQYFANQPE PVITVTVEDA RAEDWQDTIP
AVGTLRAING VTVGAAVAGI VETISFESGQ RVKKGDLLVR LDDGEERGEL DAVRAQAELS
RITAGRARRL VQSAAGTRAN LDDAEAQLRV NLATIGQLEA RVAKKTVTAP FDGVLGVRAV
DLGEYVTAGQ TLVDLQDLSV ILADFSVSQK DLGRVAVGAK LTLTTDAWPG RAFEGTIKAI
APKVDANTGM AVVEGRFDNP DGALRPGMFA KLAVLRAERQ SVVTVPATAV TYSLHGDALY
VLKEAGEDGK VRVDRITVTT GVRRGDRVVV TAGLSAGQRV VTSGQVKLND GSAVAVAQAP
LNTAARAESG AKGDSTKDTL R
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