| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3660 |
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| Symbol | |
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| ID | 3837116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 4201854 |
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| End bp | 4203170 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637827784 |
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| Product | tRNA and rRNA cytosine-C5-methylase |
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| Protein accession | YP_428741 |
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| Protein GI | 83594989 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases
[COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.469225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGATA CCGCCACCGC CACGCGGGCC GCCGCGCTCG ACCTCCTCTC GGCCGTTCTC
GATCACGGCC GGCCCCTGGA CGACGTTTTC GACGCGGCGA CGCGCAAGCT GGAGCCGCGC
GACCGGGCCT TCGCCCGCCT GCTCGCCGCC ACCACGCTGC GACGGATGGG TCGCCTGGAA
AAGGTCATCA AGACTTTCCT CGACCGGCCG CTGCCGCGCC GGGCGGTCGG CGCCAAGCAT
ATCCTGCGCC TGGGCGCCGC CCAGATGCTG TTCCTTGACA CGCCCCCCCA TGCCGCCGTC
GCCACCTCGG TCGATGTCGC CCGCGTGCGC CGGCTCGCCC CCTATGCCGG GCTGATCAAC
GCGGTTTTGC GCAAGGTCGC CGATCACGGC GCCGCCCGGC TGGCCGGCTT TGACGATCCC
TTGGCCGATC TGCCGCGCTG GCTGGGTCAA AGCTGGATCG CCGCCTATGG GGCCGAGACG
GCGGCCCGTC TGGCCGAGGC CTGCGGCCGC GAGGCGCCCC TTGATCTGAC GCCGCGCGAC
GGCGATGGCG GGGCGTTGGC CGAGCTGGTC GGCGGGCTGG CCCTGCCCGG CGGTTCGGTC
CGCCTGCCCA CCGCCACCGC CGTGCGCGAG TTGGCGGGCT TCACCGAGGG CCAATGGTGG
GTGCAAGACG CCGCCGCCGC CCTGCCGGTG CTGCTGGCCG GGGTGCCGCT CAAGGGCGCC
CGCGTCGTTG ATTTCTGCGC CGCCCCCGGT GGCAAGACCC TTCAACTGGC CGCCGCCGGC
GCCCAAGTCT GGGCGGTCGA CCGCTCGGCG ACCCGCCTCG CCCGCCTGCG CGAGAACCTG
GAACGCACCG GCCTGGGCGA CGCGGTGAAC GTGGTCGAGG GCGACGCCCT GACCTTCACC
CTTACGGACG GCCAGCAAGC CGATGTGGTG TTGGTCGATG CGCCCTGCAC GGCCACCGGC
ACCTTCCGCC GCCATCCCGA CGCGCCCTGG CTCAAGCGGC CGGGCGACGC CGCGGCGCTG
GCCGCCCTTC AGGACTCGCT GCTTGACGCC GCCGTGCGGC TGGTACGTCC GGGCGGCGTG
ATCGTTTACT GCGTCTGCTC GCTTCAACCC GAGGAGGCCG CCCCGCGCAT CGAAGCCCTG
CTCGCCCGCA GCCCCGAGAT CAGCCGCAAG CCGATCACCG CCGGCGAAGG CGGGGTGAGC
GACGAGATGA TCACCGCCGA GGGCGATGTC CGGCTGTTTC CCTTTCACCT CGACGCCGTG
GGCGGCCTTG ATGGCTTCTT CATCGCCCGG CTGGTTCGCG GGGACGCGCC GCGGTGA
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| Protein sequence | MKDTATATRA AALDLLSAVL DHGRPLDDVF DAATRKLEPR DRAFARLLAA TTLRRMGRLE
KVIKTFLDRP LPRRAVGAKH ILRLGAAQML FLDTPPHAAV ATSVDVARVR RLAPYAGLIN
AVLRKVADHG AARLAGFDDP LADLPRWLGQ SWIAAYGAET AARLAEACGR EAPLDLTPRD
GDGGALAELV GGLALPGGSV RLPTATAVRE LAGFTEGQWW VQDAAAALPV LLAGVPLKGA
RVVDFCAAPG GKTLQLAAAG AQVWAVDRSA TRLARLRENL ERTGLGDAVN VVEGDALTFT
LTDGQQADVV LVDAPCTATG TFRRHPDAPW LKRPGDAAAL AALQDSLLDA AVRLVRPGGV
IVYCVCSLQP EEAAPRIEAL LARSPEISRK PITAGEGGVS DEMITAEGDV RLFPFHLDAV
GGLDGFFIAR LVRGDAPR
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