Gene Rru_A3646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3646 
Symbol 
ID3837102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp4186316 
End bp4186807 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content68% 
IMG OID637827770 
Productprotein tyrosine phosphatase 
Protein accessionYP_428727 
Protein GI83594975 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.778837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATCGTA TTCTTTTCGT CTGCACCGGC AATATCTGCC GCTCGCCCAC CGCCGAGGTT 
GTGTTCCGGG CCAAGGCCCA GGCCGCCGGT TTGGGGGAGC GGGTTTTTGT CGATAGCGCC 
GGGACCGCCG GCTATCACGT GGGCGAGCCC GCCGACGGCC GGTCGGCGGA GGCGGCGCGG 
CGGCGCGGCT ATCGCTTCGA GGGCCAGATC GCCCGTCAGG TGCGGGCCGA TGACTTCGAA 
ACCTTCGACC TGATCCTGGC GCTCGATGCC GGCCATCTGG CGGCCTTGCG CCGCCTATGT 
CCGCCGGCGC GGCGCGATCG GCTGGCGCTG CTGATGGATC ACGCCTCGTC GCCCTGGGTC 
GGCACGGATG TGCCCGATCC CTATTATGGC GGGGCCGGCG GTTTTGATGA CGTGCTCGAT 
CGTATCGAAG ACGCCTGCGA CGGGCTGGTC ACCCGGCTGA ACGCCGCCCC TCTCGTCTCC 
GGAAAATCCT AA
 
Protein sequence
MHRILFVCTG NICRSPTAEV VFRAKAQAAG LGERVFVDSA GTAGYHVGEP ADGRSAEAAR 
RRGYRFEGQI ARQVRADDFE TFDLILALDA GHLAALRRLC PPARRDRLAL LMDHASSPWV 
GTDVPDPYYG GAGGFDDVLD RIEDACDGLV TRLNAAPLVS GKS