Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3586 |
Symbol | |
ID | 3837042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 4129234 |
End bp | 4130292 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637827710 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_428667 |
Protein GI | 83594915 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0589826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCAACC GCATTCGTCT TGTGGCCGCC ATCATCGTGG CGCTGCTGCT GGTCTCTATT GCCGTGCTGG TGATGGGCCC GGCGCCCAAC TTCTCCCCCG AAGCCCCCAA ACCGAGGTCC GGCGCCCTGG CCCCGGGCCC TGGCGCCACC CCCGGCCCCG CCCCTGGTCC CGCGTCGGGC GCCCTTCCCG CCCCGGCCCC CACCTCCCCG CAATCGGCGG CCAAGCCTTT GGCCTTCGAT ATCTTGCGCA TTGAAAAGGA TGGCGCCCTG GTCGCCGCCG GCCGGGCCGA GCCCGGGGCG GCGGTGATCT TGCGCGACGA GCGGGGAATT CTTGCCGAGG GCCGCGCCGG CGCGCGGGGC GACTGGGTGC TGACGCCCAG CCGGCCGCTG GCGGCGGGGG ATCATCTGCT GTCGCTTGAA AGCCGTGACG CCAGCGGCCC GCCGCGTGTT CTCGATGAAA AGGTGGCGGT CAGCGTTCCC CAGCCGGCCA GCCCGGCCCC GGTGATCGCC CTGGCCCAGC CTTCGGTCGG GCCTTCGCGC CTGCTGCAGG GGCCGCCGCC GGTCAGCGGA GCGGCGGAGT CGACCGATCT GGTGATCGTC ACCGTCGATT ACGATGAAAG CGGACGATTG TCGGTGGGCG GCACGGCGGC GCCCGGCGAC AGCGTGCGCG CCTATCTTGA TAACACGGCG ATCGGCGAGG GCGTGGTTGG CGCCGACGGC CGGTGGGCGG TGACCACTCC CTCGCCCCTC GCTCCGGGCC GCTATACCCT GCGCGCCGAT GCGATCGGCC CCGGGGGCAA GGTCGGCGGC CGGGTGGAAA TTCCCTTCCT GCGTCCCGAT GTCCTGCCCA GTCCGGGGGA CGGCGGCATG ATGTTCGTCG TCCAGCCCGG TAATAATCTG TGGGCGCTCG CCCGCCGGGT CTATGGCGAG GGAACGCGCT ATACCGTGAT CTATGAAGCC AATCAGGCGC AGATCCGCGA TCCCGATCTG ATCTATCCCG GCCAGATCTT CGCGGTTCCC GACCAACCCG GGCGCCCCCC GGCCACCTCG TCCCCCTAA
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Protein sequence | MTNRIRLVAA IIVALLLVSI AVLVMGPAPN FSPEAPKPRS GALAPGPGAT PGPAPGPASG ALPAPAPTSP QSAAKPLAFD ILRIEKDGAL VAAGRAEPGA AVILRDERGI LAEGRAGARG DWVLTPSRPL AAGDHLLSLE SRDASGPPRV LDEKVAVSVP QPASPAPVIA LAQPSVGPSR LLQGPPPVSG AAESTDLVIV TVDYDESGRL SVGGTAAPGD SVRAYLDNTA IGEGVVGADG RWAVTTPSPL APGRYTLRAD AIGPGGKVGG RVEIPFLRPD VLPSPGDGGM MFVVQPGNNL WALARRVYGE GTRYTVIYEA NQAQIRDPDL IYPGQIFAVP DQPGRPPATS SP
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