Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3579 |
Symbol | |
ID | 3837035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 4122796 |
End bp | 4123677 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637827703 |
Product | heat shock protein HtpX |
Protein accession | YP_428660 |
Protein GI | 83594908 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.421936 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCTTCT TCCGCGTCGC CGTGATGTTG GCCGCCATGA CCGGCCTGTT CCTTGCCGTC GGCTATCTGA TCGGCGGCCA GAGCGGCATG GTCATCGCCT TTCTGGTCGC CGGCGGCATG AACCTGTTCG CCTATTGGAA TTCCGACAAG ATGGTGCTGC GCATGCACAA TGCGCGCGAG GTCGACGAAC GCAGCGCGCC CGACCTGTAT GGCATCGTCC GCCAGTTGAC CCAGCGCGGC GGCCTGCCGA TGCCCAAGGT CTATGTGATC GACACCCCCC AGCCCAATGC CTTCGCCACC GGCCGCAATC CGCAAAACGC CGCCGTGGCG GCGACGACCG GGCTGATGCG GGCGCTCACC CCCCAGGAAC TGGCCGGAGT GATGGCCCAT GAACTGGCCC ATGTCCGCCA TCATGACACC CTGACCATGA CCCTGACCGC CACCCTGGCC GGCGCCATCT CGATGCTGGC GAATTTCGCC TTCTTCTTTG GCGGCAACCG CGACAACAAC AATCCGCTGG GCGCCGTCGG CATGATCGTG ATGATGATCC TGGCGCCTTT GGCGGCGATG ATGGTGCAGA TGGCGATTTC ACGCACCGCT GAATACCGCG CCGATCGCGG CGGCGCCGAG ATCTGCGGTC AGCCGCTGTG GCTGGCCAGC GCCCTTGAAA AGATCGAACG CGCCGCGCGC GGCATCGAAA ACCCCTCGGC CGAACAGAAT CCGGCCACCG CCCATCTGTT CATCATCAAT CCCTTGAACG GCCATCGGAT GGACAATCTG TTCACCACCC ATCCCAGCAC CGCCAACCGC GTGGCCAAGC TGCGCGCCCT GGCCAGTGGC GACCTCGCTC AGCCCCGGCC CCAGCGCGGC CCCTGGGGCT GA
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Protein sequence | MSFFRVAVML AAMTGLFLAV GYLIGGQSGM VIAFLVAGGM NLFAYWNSDK MVLRMHNARE VDERSAPDLY GIVRQLTQRG GLPMPKVYVI DTPQPNAFAT GRNPQNAAVA ATTGLMRALT PQELAGVMAH ELAHVRHHDT LTMTLTATLA GAISMLANFA FFFGGNRDNN NPLGAVGMIV MMILAPLAAM MVQMAISRTA EYRADRGGAE ICGQPLWLAS ALEKIERAAR GIENPSAEQN PATAHLFIIN PLNGHRMDNL FTTHPSTANR VAKLRALASG DLAQPRPQRG PWG
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