Gene Rru_A3558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3558 
Symbol 
ID3837013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp4097786 
End bp4098538 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content61% 
IMG OID637827681 
Producthypothetical protein 
Protein accessionYP_428639 
Protein GI83594887 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.487101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTACG ACGTCAGACG TGAGCATCTG TCACGCGGCC AGGCCGGGGT CGCGACGGAC 
GCCCAGGTGG ATGCCGGCCT TCGTACTTAC ATGCTGCGTG TGTACAACTA CCTGGCATCG
GGGCTCGCCT TGTCGGGCGT CATCGCCATG TCGGTGGTCT ACACGCCGCT CAGCGCCGCC
TTTTATCAGG TCTCGCCCGA AGGGCAGCTG ATGGGCCTGA ACATGCTGGG CATGATCGCG
GTCTTCGCGC CGCTCGGCCT GCTGTTCCTG GCGATGTTCG CCGCTCAGAA AATGAGCGCC
GCGGCCTCGC AGATGTTCTA TTGGGCCTTC GTCGCCCTGC AGGGCGTCAG CCTGTCGACC
CTTCTGCTGG TTTACACCGG CGAAAGCATC GTGCGGGTGT TCTTCATCAC CGCCGGTACC
TTCGCCGCGC TCAGCCTTTA TGGCTATACG ACCAAGCGCG ACCTTGCCGG CTTTGGCAAG
TTCCTGTTCA TGGGGTTGAT CGGCATGCTT CTGGCTGCCG TGGTCAATAT CTTCCTGGGC
AGCAGCATGC TGCAGTTCGT GGTTTCCGCG GTTGGCGTTC TGGTGTTCTC GGGGTTGATC
GCCTATGACA CCCAGGCCAT CAAGGAGCGT TATTACGACG GTCTTGGCCG CGACAGCGAA
ACCAAGATGG CGGTGTTCAG CGCTCTCGCC CTCTATCTGA ACTTCATCAA CCTGTTGCAG
TTCCTGCTCT ACTTCCTGGG TAACCGCGAG TAG
 
Protein sequence
MVYDVRREHL SRGQAGVATD AQVDAGLRTY MLRVYNYLAS GLALSGVIAM SVVYTPLSAA 
FYQVSPEGQL MGLNMLGMIA VFAPLGLLFL AMFAAQKMSA AASQMFYWAF VALQGVSLST
LLLVYTGESI VRVFFITAGT FAALSLYGYT TKRDLAGFGK FLFMGLIGML LAAVVNIFLG
SSMLQFVVSA VGVLVFSGLI AYDTQAIKER YYDGLGRDSE TKMAVFSALA LYLNFINLLQ
FLLYFLGNRE