| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3554 |
|---|
| Symbol | |
|---|
| ID | 3837009 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 4092792 |
|---|
| End bp | 4093958 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637827677 |
|---|
| Product | chaperone protein DnaJ |
|---|
| Protein accession | YP_428635 |
|---|
| Protein GI | 83594883 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.562407 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTAG CGGAGTCCAG TGCGCCAGCC ATGACCAAAC GCGATTTCTA TGAGGTCCTC
GGCGTGTCTA AGGGCGCGTC GAACGACGAG ATCAAAAAGT CCTACCGCAC GCTCGCCATG
CGGTATCACC CGGACCGCAA TCCCAATGAC GCGGAAGCCG AAGCCAATTT CCGCGAAGTC
AACACCGCCT ATGAGGTTCT GAAGGACGAG CAGAAGCGCG CCGCCTATGA CCGCTTCGGT
CATGCCGCCT TCGAGCAGGC CGGGGCCGGT CGTGGCGCCG GCGACTTCGG CTTTGGCGCC
GGATTCGCCG ATATCTTCGA CGAGATGTTC GGCGAGTTCA TGGGCGGCGG CCGACGCGGC
GGCTCGACCG CCATGCGCGG CGCCGATCTG CGCTATAATA TGGAGATCTC CCTCGAGGAG
GCCTTCGCCG GCAAGAAGAC CACCGTCCAC GTTCCCACCA GCGTGTCGTG CGAGTCCTGC
CGGGGCTCGG GCTCCAAGGG CGGCGCGGCG CCTGATGGCT GTCCGACCTG TCATGGCAGC
GGCCGGGTTC GCGCCCAGCA GGGCTTCTTC ACTATCGAAC GCACCTGTCC GACCTGCCAC
GGCCAGGGCA AGGTCATCCG TGACCCCTGC CCCGACTGCG CCGGTTCGGG CCGTCAGCGC
CGGGAAAAGA CCCTTGAGGT CACCATCCCC GCCGGCGTCG AGGAAGGAAC CCGCATCCGA
CTGGCCGGCG AGGGTGAGGC CGGATTGCGT GGCGCCCCTT CGGGCGATCT CTATATTTTC
CTGACCATCG CCCCCCATCG CATCTTCCTG CGCGATGGCG CGAATATCGC CTGCAAGGTG
CCTATTCCGA TGACCACCGC CGCCCTGGGC GGCACCATCG AGGTGCCGAC GATCGACGGC
GGCCGGGCGG CGGTGACCAT TCCCCAGGGC ACCCAGACCG GCAATCAGTT CCGTCTGCGG
TCCAAGGGCA TGAGCGTACT GCGCAGCGCC TCGCGCGGCG ACATGTTCGT TCATGCGGTG
GTGGAAACCC CGGTCAATCT GACCAAGCGT CAGGAGGAGT TGCTGCGCGA ATTCGAGGAG
GCCGGCGACA AGGACACCGC CCACAGCCCC GAATCGTCGA GCTTCTTCAA GAAGGTCAAG
GAATTCTGGG AAGACATCGC CGGCTGA
|
|---|
| Protein sequence | MPVAESSAPA MTKRDFYEVL GVSKGASNDE IKKSYRTLAM RYHPDRNPND AEAEANFREV
NTAYEVLKDE QKRAAYDRFG HAAFEQAGAG RGAGDFGFGA GFADIFDEMF GEFMGGGRRG
GSTAMRGADL RYNMEISLEE AFAGKKTTVH VPTSVSCESC RGSGSKGGAA PDGCPTCHGS
GRVRAQQGFF TIERTCPTCH GQGKVIRDPC PDCAGSGRQR REKTLEVTIP AGVEEGTRIR
LAGEGEAGLR GAPSGDLYIF LTIAPHRIFL RDGANIACKV PIPMTTAALG GTIEVPTIDG
GRAAVTIPQG TQTGNQFRLR SKGMSVLRSA SRGDMFVHAV VETPVNLTKR QEELLREFEE
AGDKDTAHSP ESSSFFKKVK EFWEDIAG
|
|---|
| |