| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3542 |
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| Symbol | |
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| ID | 3836997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 4076906 |
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| End bp | 4079167 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637827665 |
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| Product | malic enzyme |
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| Protein accession | YP_428623 |
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| Protein GI | 83594871 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.196969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACG AAACCAACCG CAATCTCGAT CGTGAGGCCC TTCTGTTCCA CATCACCGGC
CGTCCGGGCA AGATCGAGAT CGCCGCCACC AAGCCGCTGA CCACCCAGCG CGATCTGTCG
TTGGCCTATT CGCCGGGGGT GGCCGCGCCC TGCCTCGCCA TCCAGCGCGA TCCCACCACC
GCTTATGATT ATACCGCCAA GGGCAATATG GTCGCCGTCA TCTCCAATGG CACCGCCGTG
CTCGGGCTGG GCGATCTGGG CGCCCTGGCC AGCAAGCCGG TGATGGAGGG CAAGGCGGTT
CTGTTCAAGA AGTTCGCCGA TGTCGACGGC ATTGATCTTG AAGTCGATAC CCGCGACGTC
GATGAATTCG TCAATTGCGT GCGCTACCTG GGGCCGACCT TCGGCGGCAT CAACCTGGAA
GACATCAAGG CCCCCGAATG CTTCATCATC GAGCAGCGCC TGCGCGCCCT GATGGACATC
CCCGTCTTCC ATGACGACCA GCATGGCACG GCGATCATCG CCGCCGCCGG GCTGATCAAC
GCCCTTGACC TGTCGGGCCG CGATATCGGC GACGCCAAGA TGGTGGTCAA TGGCGCCGGC
GCCGCCGCCA TCGCCTGCGT CGAGCTGGTC AAGGCGATGG GCATGCGCTC GGCCAATGTC
ACGCTGTGCG ATTCCAAGGG CGTCGTCCAT CGCGGGCGCA GCGATCTCAA CCAGTGGAAA
TCCGCCCACG CCATCGATAC CGAAGCCCGC AGCCTGCAAG ACGCCATGCG CGGCGCCGAC
GTGTTCTTGG GCCTGTCGGT CAAGGGCGCG GTCACGGCCG AGATGGTGGC GACGATGGCG
CCCCAGCCGA TCATCTTCGC CATGGCCAAC CCCGACCCGG AAATCACCCC CGAAGACGTG
CTTTCGGTGC GCGACGACGC CATCATCGCC ACCGGCCGGT CGGATTATCC CAACCAGATC
AACAATGTTC TCGGCTTCCC CTATATCTTC CGCGGCGCGC TTGACGTGCG GGCCCGCACC
ATCAACGACG AGATGAAGAT CGCCGCCGCC CGCGCCATCG CCGCCCTGGC CCGCGAGGAC
GTGCCCGACG AGGTGGCCGC CGCCTATTCG GGCCGGCGCC TGCGCTATGG CCGCGACTAT
ATCATCCCCG TGCCCTTCGA TCCCCGGCTG ATCGCCGCCA TCTCCCCGGC GGTGGCCGAG
GCGGCGATGC GCTCGGGCGT CGCCCGCAAG CCGATCATCG ACATCATCGG CTACCGGCGC
GAGCTGTCGG CCCGCCTCGA TCCGACGGCG GCCAGCCTGC AGGCGCTGTC GGCCCAGGTC
ATCAACAATC CCAAACGGGT GGCCTTCGCC GAGGGCGAAG AGGAAAAGAT GATCCGCGCC
GCCCTGTCTT ACCGCAATGC CGGCTATGGC ACGCCGATCC TGATCGGCCG GGCCGAGAAG
ATCGCCGCCA CCATGGCCGC GATGGGGCTG GGCGGCCTGG AGGGCATGGA GATCCAGAAC
GCCAAGCTCT CGACCCAGAC CAAGCCTTAC ACCGATTACC TGTACGGCCG CCTGCAGCGC
CATGGCTACC TTTATCGCGA TGTCCAGCGG CTGGTGAACA GCGACCGCAA TGTCTTCGCC
GCGTCGATGG TGATGCTTCA AGACGCCGAC GCCATGGTGA CGGGCACCAT CCGCCACTTC
CACAGCTGCC TGTCCGACAT CACCAAGGTC ATCGATCAGA CCCCGGGCGA GTTGGTGTTC
TCGGTCACCT TGCTGATCGC GCGCGGCCGC ACCGTGTTCA TCGCCGATAC CAATGTCCAC
GAGGCGCCCT CGGCCCAGGA ACTGGCCGAT ATCGCCATCC AAACCGCCGC CCTGGCCCGG
CGCATGGGTC ACGAGCCGCG CGTCGCCCTG CTGTCCTATT CGACCTTCGG CGCGCCGCTC
GGCCGCACCC CCGACCGCCC GCGTCAGGCC GTCGCCCTGC TCGAGGACCG CAAGGTCGAA
TTCGAATTCG ACGGCGAGAT CGGCGTCCAT GTCGCGCTCG ATCCCGATCT GCTCAAGCTC
TATCCCTTCT GCCGGCTGTC GGCGCCGGCC AATGTGCTGA TCATGCCGGG GCTGCATTCG
GCCAATATCA GTTCCAAGCT GATGCAGAAG ATGGGCGGGG CGACCACCAT CGGACCGGTG
CTGATGGGGC TGTCGCGGCC TTGCCAGATC GTGCCGATGG ACGCCACCGT ATCGGACATC
GTTCACATGG CCACCCTCGC CGCCGCCGAG GCCGGGCGTT AA
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| Protein sequence | MADETNRNLD REALLFHITG RPGKIEIAAT KPLTTQRDLS LAYSPGVAAP CLAIQRDPTT
AYDYTAKGNM VAVISNGTAV LGLGDLGALA SKPVMEGKAV LFKKFADVDG IDLEVDTRDV
DEFVNCVRYL GPTFGGINLE DIKAPECFII EQRLRALMDI PVFHDDQHGT AIIAAAGLIN
ALDLSGRDIG DAKMVVNGAG AAAIACVELV KAMGMRSANV TLCDSKGVVH RGRSDLNQWK
SAHAIDTEAR SLQDAMRGAD VFLGLSVKGA VTAEMVATMA PQPIIFAMAN PDPEITPEDV
LSVRDDAIIA TGRSDYPNQI NNVLGFPYIF RGALDVRART INDEMKIAAA RAIAALARED
VPDEVAAAYS GRRLRYGRDY IIPVPFDPRL IAAISPAVAE AAMRSGVARK PIIDIIGYRR
ELSARLDPTA ASLQALSAQV INNPKRVAFA EGEEEKMIRA ALSYRNAGYG TPILIGRAEK
IAATMAAMGL GGLEGMEIQN AKLSTQTKPY TDYLYGRLQR HGYLYRDVQR LVNSDRNVFA
ASMVMLQDAD AMVTGTIRHF HSCLSDITKV IDQTPGELVF SVTLLIARGR TVFIADTNVH
EAPSAQELAD IAIQTAALAR RMGHEPRVAL LSYSTFGAPL GRTPDRPRQA VALLEDRKVE
FEFDGEIGVH VALDPDLLKL YPFCRLSAPA NVLIMPGLHS ANISSKLMQK MGGATTIGPV
LMGLSRPCQI VPMDATVSDI VHMATLAAAE AGR
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