Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3509 |
Symbol | |
ID | 3836963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 4036633 |
End bp | 4038600 |
Gene Length | 1968 bp |
Protein Length | 655 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637827631 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_428590 |
Protein GI | 83594838 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATCCA GACGTTCCCG CCGCGCCCCC GAGTATGCCG ATGTCCACCG GCTCGACACC TTTCCCAAGG TTCTGGCCGA CAACGCCAAA CGCTTCCCCC AGGATATCGC ACTGCGGGAA AAGGATCTGG GGATCTGGAA AGAGGTCACC TGGGCCGAGT ACGGGCTCAT GGTGCGGCTT TACGCCCTGG GGCTGAAGGA TCTGGGGGTA GAGCGCGGGC AGGTGATCGC CCTGCTTGGC GCCAACCGCC CCGAATGGCT TTGGGGCGAG ATCGCCGCCC ATGCCCTGGG CTGCGCCTCG CTTGGCATCT ACAAGGACGT GCTCGACGAC GAGGCGGACT ACCTGCTGGC CCATTCCGGC GCCGTGGCGG TGATCGCCGA GGACGAGGAG CAGGTTGACA AGCTGCTGAC CCTGGCGGCG CGGGTGCCCA GCCTGCGCCA TATCGTTTAT TGCGATCCCC GGGGCTTGCG CAAATACAGC GATCCCCGGC TGATTTCGCA AGACGACCTC AAGGCCCGGG GCCGCGCCCT CGACGCCCGC GACCCCGGGC TTTACGAGCG CGAGGTGGCG GCGGGCCATG GCGACGACGT GGCGGTGCTG TGCACCACCT CGGGCACCAC GGCGCGGCCC AAGCTGGCGA TGCTCCAGGC CGGGGCCTTC CTGCGCCATT GCCTTGATTA CCTCGAGGCC GATCCGCGCC ATCCCGGCGA TGATTACGTC TCGGTGCTGC CGCTGCCCTG GATCATGGAG CAGGTCTATG CGGTCGGTCA GGCGCTGATT GCGCGCGGCA TCGTCAACTT CGTCGAGGAG GAGGCGACCA CCATGGCCGA TCTGCGCGAG ATCGGCCCGC GCTTCGTTCT GCTCGCCCCC CGCGTTTGGG AGGGGATCGC CGCCGATGTG CGGGCGCGGA TGATGGACGC CAGCCCCTTC AAGCGGGCGA TGTTCGAGAT CGGCATGGGC CTTGGCAAAC GGGCGCTGGC GCGCAACCGC CGCTCCTGGC TGGCCGAGGC GCTGCTGTTT CGCGCCTTGC GCGACCGCTT GGGCTTTTCC TTCCTGACCA GCGCCGCCAC CGGCGGCGCG GCGATGGGGC CGGAGACCTT TTCGTTTTTC CATGCCATGG GGGTGCCGCT CAAGCAGCTC TATGGCCAGA CCGAACTGGC CGGGGCCTAT GTCATCCACC GCGCCGGCGA CATCGATCCC GAAACCGTCG GCCTGCCCTT CGCCAAATCG GCGGTGCGCA TCGACAACCC CGATGCCGAG GGGGTGGGCG AGATCCTCGG CCGCGACCAG GGGCTGTTCG CCGGGTATTT CGGAGCGGGC GACGCCACGG CGATCGATGA CCTGCGCGAT GGCTGGCTCC ATACCGGCGA CGCCGGCTTC CTGAAAAAAG AAAACGGCCA TCTGGTGGTG ATCGACCGGG TGAAGGATCT GGCGGTGATG AGCAATGGCG TGCGCTTCAG CCCGCAGTTC ATCGAAAACA AGCTGAAATT CTCGGCCTTC ATCGCCGAGG CGGTGATCCT GGGGCGCGAC CGGCCCTATC TGGCCGCCAT CATCTGCATC CGCTGGTCAA TCCTGGCCAA ATGGGCCGAA CAGCGGGCGA TTTCCTTTAC CGGCTATTCC AGCCTCGCCG CCCGGCCCGA GGTGTATGCC CTGCTGCGCG CCGAGGTCGA GCGGGTCAAC GCCAGCCTGC CCGCCGCCCA GCGCGTGCGC AAGTTCTTGC TGCTCTACAA GGAGCTTGAT CCCGACGACG GCGAGCTGAC GCGCACGCGC AAGGTGCGGC GCGGCGTGGT CGCCGAGAAA TACGCCAAGG AGATCACCGC CCTTTACCAG GGGGACGACG CCGTCGACAT CGATACCCAT ATCACCTTCC AGGATGGCAC GACGGCGCGC ATCCAGACCC GTCTTAAGGT GGAAACCCTG ATTTCGGCCG ATGAGAACGG CCCGATTGCG TCAAAGGCCG CGGAATGA
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Protein sequence | MASRRSRRAP EYADVHRLDT FPKVLADNAK RFPQDIALRE KDLGIWKEVT WAEYGLMVRL YALGLKDLGV ERGQVIALLG ANRPEWLWGE IAAHALGCAS LGIYKDVLDD EADYLLAHSG AVAVIAEDEE QVDKLLTLAA RVPSLRHIVY CDPRGLRKYS DPRLISQDDL KARGRALDAR DPGLYEREVA AGHGDDVAVL CTTSGTTARP KLAMLQAGAF LRHCLDYLEA DPRHPGDDYV SVLPLPWIME QVYAVGQALI ARGIVNFVEE EATTMADLRE IGPRFVLLAP RVWEGIAADV RARMMDASPF KRAMFEIGMG LGKRALARNR RSWLAEALLF RALRDRLGFS FLTSAATGGA AMGPETFSFF HAMGVPLKQL YGQTELAGAY VIHRAGDIDP ETVGLPFAKS AVRIDNPDAE GVGEILGRDQ GLFAGYFGAG DATAIDDLRD GWLHTGDAGF LKKENGHLVV IDRVKDLAVM SNGVRFSPQF IENKLKFSAF IAEAVILGRD RPYLAAIICI RWSILAKWAE QRAISFTGYS SLAARPEVYA LLRAEVERVN ASLPAAQRVR KFLLLYKELD PDDGELTRTR KVRRGVVAEK YAKEITALYQ GDDAVDIDTH ITFQDGTTAR IQTRLKVETL ISADENGPIA SKAAE
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