| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3508 |
|---|
| Symbol | |
|---|
| ID | 3836962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 4035653 |
|---|
| End bp | 4036546 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637827630 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_428589 |
|---|
| Protein GI | 83594837 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.771205 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGGGG AGCTTCTGTT CCAGCTTCTG CTGAACGGGG TGATCGTCGG CACGCTCTAT
GGCGTGGTGG CGATGTGCTT CGTGCTCATC TACAAGTCGA CGCAGGTGGT GAACTTCGCC
CAGGGGGAAT TCCTGCTGAT CGGCGCCTGG GTCTGTTTTT CGCTGCTGAC CGATTTCCAG
CTTCCCTTCG TTCTCGGCTT TCTGTTCACC CTGGTTTTCA TGATGGCCTT TGGCGTCTTG
CTCCAGGTCG TGGTGCTGCG GCCGATGATC GGCGAGCCGA TCATCTCGGT GATCATGGTG
ACCATCGGGC TGTCGATCTT CCTGCGCGCC CTGGTCAACT GGGTCTTCGG CCAAAGTGCC
CGCAGCTTCC CCAAGATCTT CGAGGCCGAG TCCGTCACTA TCGCCGGCCT GAATGTCGAG
CCGGCCTATC TGATGAGCTT CGCCATCTCG ATCATTATCA TGATCGGCTT TTACTATTTC
TTCCGCTATT CGCGCCACGG GCTGGCGATG CGGGCCACCG CCTTCGACCA GCAGGCCGCC
CAATCCCTGG GGATCTCGGT CAAGCGCGTC TTCGCCATGG CCTGGGCGAT CTCGGCCATG
GTCAGCGCCT TGGCCGGGGT GGTGATGGGC ATGGTCAACG GCGTGTCCTC GGCCTTGTCG
TTCGTCGGCA TCAAGGTGTT TCCGGCGGTG ATCCTGGGCG GGCTAGACAG CATCATCGGC
GCCATTGTCG GCGGGCTGAT CATCGGCGTT CTGGAAAACG GCGCGGAATT CGTCGACGGC
CAGTATCTGC ACTGGGGCAA TATGCTGACC ATCGCGCCGT TCTGGGTGCT GATCGCCATC
CTGGTCATCA AGCCCTATGG CTTGTTCGGC ACCAAGAAAA TCGAGCGGGT GTAA
|
|---|
| Protein sequence | MNGELLFQLL LNGVIVGTLY GVVAMCFVLI YKSTQVVNFA QGEFLLIGAW VCFSLLTDFQ
LPFVLGFLFT LVFMMAFGVL LQVVVLRPMI GEPIISVIMV TIGLSIFLRA LVNWVFGQSA
RSFPKIFEAE SVTIAGLNVE PAYLMSFAIS IIIMIGFYYF FRYSRHGLAM RATAFDQQAA
QSLGISVKRV FAMAWAISAM VSALAGVVMG MVNGVSSALS FVGIKVFPAV ILGGLDSIIG
AIVGGLIIGV LENGAEFVDG QYLHWGNMLT IAPFWVLIAI LVIKPYGLFG TKKIERV
|
|---|
| |