| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3479 |
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| Symbol | dapD |
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| ID | 3836932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 4004094 |
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| End bp | 4004945 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637827600 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
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| Protein accession | YP_428560 |
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| Protein GI | 83594808 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCACGC CGAGCTTGCA GACCACCATC GAGGCCGCCT GGGAGAGCCG CGAGGGCGTG
ACCCTGGAGA CGCGGGGAGC CGTGCGCGAC GCGGTCGAGG CCGTGCTCGA CGGCCTGGAC
GCCGGGATCT ATCGCGTCGC CGAAAAGATC GGCGAGACCT GGGTTGTCCA TCAGTGGCTG
AAGATGGCGG TGCTGCTGTC CTTCCGCCTC AACGACATGA CACCGGTTTC CGGCGCGCCG
GGCGGCGCCA CCTGGTGGGA CAAGGTTCCC TCCAAATTCG CCGGCTGGGG GGAAGACCGC
TTCCGCGCCG CCGGATTCCG CGCCGTTCCC GGCGCCATCG TCCGCCGCTC GGCCCATATC
GCGCCGGGCG TCGTGCTGAT GCCCAGCTTC GTCAACCTCG GCGCCCGCGT CGAATCCGGG
GCGATGATCG ACACCTGGGC GACCGTGGGG TCTTGCGCCC AGATCGGGCG CAACGTTCAT
CTGTCGGGCG GGGCGGGGAT CGGCGGCGTG CTGGAACCCC TTCAGGCCGG TCCGGTGATC
ATCGAAGACA ACTGCTTCAT CGGCGCCCGC TCCGAGGTCG CCGAGGGGGT GCTGGTGGAA
ACCGGCGCCG TGCTGTCGAT GGGCGTGTTC ATCGGCGCCT CGACCCGCGT CATCGATCGT
GAGACCGGCG AGGTCTTCAT GGGCCGGGTT CCGGCCTATT CGGTGGTGGT GCCGGGATCG
CTGCCCGGTA AGCCGCTGCC CGATGGCACG CCGGGCCCCG GTCTGGCCTG CGCGGTGATC
GTCAAGCGGG TCGACGAGCG CACCCGCTCC AAGGTCTCGA TCAACGATCT GCTGCGCGAT
ACCCCGCGCT GA
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| Protein sequence | MTTPSLQTTI EAAWESREGV TLETRGAVRD AVEAVLDGLD AGIYRVAEKI GETWVVHQWL
KMAVLLSFRL NDMTPVSGAP GGATWWDKVP SKFAGWGEDR FRAAGFRAVP GAIVRRSAHI
APGVVLMPSF VNLGARVESG AMIDTWATVG SCAQIGRNVH LSGGAGIGGV LEPLQAGPVI
IEDNCFIGAR SEVAEGVLVE TGAVLSMGVF IGASTRVIDR ETGEVFMGRV PAYSVVVPGS
LPGKPLPDGT PGPGLACAVI VKRVDERTRS KVSINDLLRD TPR
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