Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3477 |
Symbol | |
ID | 3836930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 4000911 |
End bp | 4002128 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637827598 |
Product | major facilitator transporter |
Protein accession | YP_428558 |
Protein GI | 83594806 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.222248 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCGAAC CCGCCGTATT CCCCTCTCCC CGGCCCGCCC TTGGTCGCGG GGCGACCTTC GCCATGGCCG CCGCCGCTGG GCTGGCCGTC GCCAACATCT ACTATAATCA GCCGATGCTC GGCCTCATCG AAGACGCCTT CCCCGGCTCG GCCAGCCCGG GCCTGATCCC GACGGTGACC CAATTGGGCT ATGCCCTGGG TTTGTTTCTG CTGGTGCCGC TGGGGGATCT TGTCGACCGG CGGCGTCTGA TCATCGGCCA GTTCCTGGCT TTGGCCGCGA CGCTTTGTCT GACGGCGCTG GCGCCAACGG CCGGGGTGCT GGTCGGCGCC TCGCTACTGG TTGGCGCCGG GGCGACGGTG GCCCAGCATA TCGTGCCGTT TGCCGCCGCC CTGGCGCCCG ACGGCCAGCG CGGGCGGATC ATCGGCACGG TGATGGGCGG GCTGCTTTGC GGGATCTTGC TCAGCCGGAC CCTGGCCGGC GTCGTCGCCA CCCATCTGGG ATGGCGCGAG ATGTTCTGGC TGGGCGTGCC GCTGGTCCTG GCCGCCGCCG GGTTGATGGC CGCCGTGCTG CCGCGCCGGG TCGTTCCGCC GCAGGGCCTG CGCTACGGCC AAGCCTTGCG TTCGCTCGCC CATCTCTGGC GCGACGAACC GGCCCTGCGG CGGGCGACGC TGACGCAGGC CGCCCTCTTT GGCTCGTTCT CGGTCTTCTG GACGGTTCTG GCGCTTCATC TGCAAGAGCC CGCCCTGGGG CTGGGCGCCG ATGTCGCCGG CCTGTTCGGG GTTATCGGCG CGGTCGGGGT GGTGGCGGCG CCGCTGGCCG GGCGGCTGGC CGATCATCGC GGACCGGGGC CGGTGATCGT CCTCGGCGCG TCGCTGGTTC TGGTGTCCTG GGCGATTGTC GCCCTGTGGG CAAGCGTCCT TGGGCTGGTG GTCGGCGTCA TCGCCCTTGA TCTCGGCACT CAAAGCGCCC TGGTGTCCAA TCAGCATGTG GTCTATGCGC TGCGCCCCGA GGCGCGCAGC CGCCTCAACA CCGTATTCAT GAGCGGTATG TTCCTGGGAG GCGCCGGCGG ATCGGCCGGG GCGACCCTGG CCTGGAGCTT GGGCGGCTGG GCGGCGGTCA GCGGCTATGG CGCCGGGCTG GCGATCCTCG CCCTGGGGAT CTTGCGCCTT GGCCGGCCGA TCAGGTCGGA GTGTGCGGCG GCGGCAGCGA CAGACTGA
|
Protein sequence | MSEPAVFPSP RPALGRGATF AMAAAAGLAV ANIYYNQPML GLIEDAFPGS ASPGLIPTVT QLGYALGLFL LVPLGDLVDR RRLIIGQFLA LAATLCLTAL APTAGVLVGA SLLVGAGATV AQHIVPFAAA LAPDGQRGRI IGTVMGGLLC GILLSRTLAG VVATHLGWRE MFWLGVPLVL AAAGLMAAVL PRRVVPPQGL RYGQALRSLA HLWRDEPALR RATLTQAALF GSFSVFWTVL ALHLQEPALG LGADVAGLFG VIGAVGVVAA PLAGRLADHR GPGPVIVLGA SLVLVSWAIV ALWASVLGLV VGVIALDLGT QSALVSNQHV VYALRPEARS RLNTVFMSGM FLGGAGGSAG ATLAWSLGGW AAVSGYGAGL AILALGILRL GRPIRSECAA AAATD
|
| |