Gene Rru_A3436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3436 
Symbol 
ID3836888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3958953 
End bp3959714 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content66% 
IMG OID637827557 
Productnucleotidyl transferase 
Protein accessionYP_428517 
Protein GI83594765 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.604999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGCCG ATCCGGCTTC TGCCCCCGTT CTCCTCCATC CCCGACGCGC CATGGTCCTG 
GCCGCCGGTC TTGGCCTGCG CATGCGTCCG CTGACCGAAA CCATGCCCAA GCCGCTGGTG
GCGATCCACG ACAAGCCGCT GATCGACTGG GCCCTTGACC ATCTGGCCAC CGCCGGGGTC
GAGGAGGCGG TGGTCAACCT CCACCACCTG CCCGAAATGC TCGAAGCCCA TCTGCAAGGC
CGAGCCACGC CGCGCATCCA CTTCAGCGAC GAGACCGGTC AGCGCCTGGA AACCGGCGGC
GGCGTGCGCA AGGCCCTGCC CCATCTGGGC GACGACCCTT TCTATGTGCT GAATTCCGAT
GTTCTGTGGC TGAACGGCAC CATTCCGGCC CTTGACCGGC TGGCCGCCGC CTGGGACCCC
GAGACCATGG ACGCCTTGCT GCTGCTCCAT CCGCTGGCCG CCGCCCATGG CTATGAGGGC
CTGGGCGATT TCGACCTTGA TCCCTTGGGT CGGCCGACGC GCCGCGCCGA GATGCACATG
GCGCCGTTCA TTTTCACCGG CGTGCAGATC CTCCACCCCC GGCTGTTTGA CGATGCGCCC
GAGGGCCCGT TCTCGCTGAA CGTCCTTTAT GACCGGGCGC TGTCGGAAGA CCGGCTGGCC
GCCATCGTTC ACGATGGGGA ATGGTACCAT GTCGGTACCC CCCAGGCCCT GGTCCATACC
GAAACCATCC TGGGTCAGCA CAGCTCGATG AGCGACCAGT AA
 
Protein sequence
MAADPASAPV LLHPRRAMVL AAGLGLRMRP LTETMPKPLV AIHDKPLIDW ALDHLATAGV 
EEAVVNLHHL PEMLEAHLQG RATPRIHFSD ETGQRLETGG GVRKALPHLG DDPFYVLNSD
VLWLNGTIPA LDRLAAAWDP ETMDALLLLH PLAAAHGYEG LGDFDLDPLG RPTRRAEMHM
APFIFTGVQI LHPRLFDDAP EGPFSLNVLY DRALSEDRLA AIVHDGEWYH VGTPQALVHT
ETILGQHSSM SDQ