Gene Rru_A3398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3398 
Symbol 
ID3836850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3914498 
End bp3915040 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content64% 
IMG OID637827519 
ProductXRE family transcriptional regulator 
Protein accessionYP_428479 
Protein GI83594727 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAAG GCAAGCAAGC GGACGTGCGG CCCTACTCCA GCGACAACCC CGACCCCCTC 
GACAAGGAAG TCGGGCGGCG GTTGCGACTG CGCCGTAAGC TTCTCGGGTT GAGCCAGCAG
CAGTTGGCCG ATGCGGTCGG CATCACGTTT CAGCAGGTGC AGAAGTACGA GCGCGGCGTC
AACCGCCTGA GTTCCAGCCG TCTGTGGGAT TTCGCGACGA TTCTTGGCGT CAGCGTCTCG
TTCTTCTTCG AAGATCTGGA AGCCGCCGAT GTCGATCGGA CGATTCCGCG CGCCCGCCGC
GACGCCCAGG ATGAAACGAT CACCCAGACC ACCGCCGAAG ATCCGCTGGT CCGCACCGAA
ACCCTGGAAC TGTGTTACGC CTTCTGGGCG ACGACGCCGC GAGTGCGCAA GCGCTATCTT
GATTTCCTGA AGACCGCCGC CACCCTGGAA AAGCCCCTCT ACGAAGCCCC CGAGGGCACC
CAGGTTCCCA CGCCCCAGGA AATCGCGGCC GAGCGCGTCA TTCTTCCCGG CGCCGCGACC
TGA
 
Protein sequence
MRKGKQADVR PYSSDNPDPL DKEVGRRLRL RRKLLGLSQQ QLADAVGITF QQVQKYERGV 
NRLSSSRLWD FATILGVSVS FFFEDLEAAD VDRTIPRARR DAQDETITQT TAEDPLVRTE
TLELCYAFWA TTPRVRKRYL DFLKTAATLE KPLYEAPEGT QVPTPQEIAA ERVILPGAAT