Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3346 |
Symbol | |
ID | 3836798 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 3859709 |
End bp | 3861127 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637827467 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_428427 |
Protein GI | 83594675 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.176331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGACC GGATCTTCAC CGTGGCGATG GGGTTTGCTT CGGTCACCAT TCTCGCCCGC CTGTTGACCC CGGCCGAGGT CGGGGTGTTC GGCGTCGCCT ATTCCGTCGT CGGCCTTAGC CAGACGCTGC GCGATTTCGG CACCTCAAGC TATCTGATCC AGGAAAAGGA GCTGACGCCC CAGCGCATCC GTTCGGCCTT CGGCGTCACC TTGCTGACCG GATGGACGCT GGGCGGCACG ATCTTCCTGC TTGCCGACAC CATTGCCGCC TTCTATGGCC AGCCCGAACT GGCCACGGTT CTGCGCATCA TCTGCCTGAC CCTGGTGCTC TGGCCCTTCG GCTCGCCGAT CCTGTCGCTG CTGCGCCGGG ACATGCGCTT CAAGACCCTG ACGTTCATCG GCATGGCCAC AGCCCTCGCC CAACCGACGG TGGCGGTGAT CCTGGTCTAT TTGGGATACA GCTATTACGG CTTGGCCTGG GCCGTCGTCG CCGAGGTCGC GGTTTCGGTT CTGCTGACCA CCATCCTGCG CCCCAAGGAA ACCTGGATGT GGCCAAGCCT GCGCGAATGG CGGCGCGTTG GGGTCTTCGG GCTGTCGATG GCGGGGATCT CGCTGATCGG CTCGCTCAAC ACCTATGCCA GCGATCTGGT GCTTGGCCGC ACCCTGGGCT TTGTCAATTC CGGCTTCTAC AGCCGGGCGA CCGGCCTGAT CTCGCTGTTT CGCGATCGCA TCTGGGGTGG CGGCCATGCC GTGCTGATGT CGGAATTCGC CCGTTTGCAT CGCGAGGACG GCGATGTGAA GGGATCCTTC CTGCGGGCTT CGGTGATGGT GACGGGGATC TTCTGGCCGC TCTTCGCCCT GCTCGCCCTA ATGGCCCTGC CGGTGGTGCG CATCCTGTTC GGCCTGAACT GGGACGACTC GGTGCCCTTG GTCCGTTTGC TCGCCGGCGC GGCGATGATC TCGGTGCCGT GGTTTCCCGG CGGCACTTTG TTGCTGGCCA CCGGCCACGT CAATTTGCAG TTGCGCCTGA GCGTCGTCAT GGTCGCCGTG CAGATCCCCG CCCTGATCTT GCTCTCGCAT CTGGGCTTGA TCTGGGTGCC GCTGGTCAGC GTTCTGACCG GGCTGGTGAT GGCGGGGATG CTGGGCATCT ATACCCGCAG GATCCTGGGA TTGGCCGCGC TTGACGTGTG GTTCGCCACC CTGCGCAGCG TTCCCGCCAC CCTGGGCATC TGCGTCGTGC CGCTGCTGGT GCTGGTCTTT TGCCATCCCG AACCCCGACT GGGCGAGCCC TGGCTATGGG TGGCCGGCTT TGGGGCGATC CTCGGCGCGG TGATCGGCTA TTATACGGTT TCCCATCCGA TGGCCGGCGA AATCGACGCC CTGTTGCGCA AACTGCGCCG CCGCTCGTTT ATCGGCTAA
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Protein sequence | MLDRIFTVAM GFASVTILAR LLTPAEVGVF GVAYSVVGLS QTLRDFGTSS YLIQEKELTP QRIRSAFGVT LLTGWTLGGT IFLLADTIAA FYGQPELATV LRIICLTLVL WPFGSPILSL LRRDMRFKTL TFIGMATALA QPTVAVILVY LGYSYYGLAW AVVAEVAVSV LLTTILRPKE TWMWPSLREW RRVGVFGLSM AGISLIGSLN TYASDLVLGR TLGFVNSGFY SRATGLISLF RDRIWGGGHA VLMSEFARLH REDGDVKGSF LRASVMVTGI FWPLFALLAL MALPVVRILF GLNWDDSVPL VRLLAGAAMI SVPWFPGGTL LLATGHVNLQ LRLSVVMVAV QIPALILLSH LGLIWVPLVS VLTGLVMAGM LGIYTRRILG LAALDVWFAT LRSVPATLGI CVVPLLVLVF CHPEPRLGEP WLWVAGFGAI LGAVIGYYTV SHPMAGEIDA LLRKLRRRSF IG
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