Gene Rru_A3300 details

Gene Information

• Locus tag: Rru_A3300
• ID: 3836747
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 3797539
• End bp: 3799428
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637827416
• Product: ABC transporter component
• Protein accession: YP_428382
• Protein GI: 83594630
• COG category: [R] General function prediction only
• COG ID: [COG4178] ABC-type uncharacterized transport system, permease and ATPase components

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGATAC CCGACCCCTC CCCGCGTCCT TCCCCGGAAC CCGTGAAAGC CGATACCGAC 
GCCCTCTGGC CGCAAGTGCG CAGCATGGCG CGGGCCTTCT GGAAAAGCCC GGCGCGCAAC 
CGCCTGATTT TTCTGGGCGG TGGTCTGGCC ACGGTGATCG CTCTCACCGC CTTTGGCCAG 
ATGTGGCTGA ACGCCTGGAA CCAGCCGTTT TATGATTCGC TGGCGCGCAA GGATATGGAT 
GGCTTCATCC ACCAGCTTTG GGTTTTCGCC GGCATCGCCT TTCTTCTTCT CACCCTCAAT 
GTCAGCCAGA CCTGGCTCAA CCAGTCGACC AAGGTGAAGC TGCGCGAGGG GCTGGTCCGC 
GACCTGCTTG ATGACTGGCT GCAAGGACGG CGGGCCTTCC GTCTGGCCTT CAACAGCGAA 
ATCGGCGTCA ACCCCGACCA GCGCATCCAC GAGGACGCCC GCCATCTTTC CGAACTGACC 
ACCGATCTTG GCATCGGCCT GTTACAGGCC TCCTTGCTGC TCGCCACCTT CATCGGCGTG 
CTGTGGGGGC TGTCGCGGGG CATCGTCTTG CATATCGACG GGCAGGTCCT GGCCATTCCC 
GGTTATATGG TGTGGTGCGC CCTGCTTTAC GCTGGCATCG CCTCGCTGCT CAGTTGGAAG 
GTCGGCAGCC CGCTGGTCCG GCTAAATGCA TTGCGCTATG CCCGCGAAGC CGATCTGCGC 
TTCAATTTGG TCCGGGTCAG CGAACATATG GAGGGCATCG CCCTCCACGG CGGCGAGGCC 
GATGAACGCG ACCGTCTGTC GAGCGATCTC GACCGCGTTC TGGGCATCAT GCGCCGCATC 
GTCGGCGCGG TGACCGGCCT GACCTGGATC ACCGCCGGCT ATGGCTGGTT CACCCTGGTG 
GCGCCGATCC TGGTCGCCGC GCCGGGCTAT TTCCACGGCA ATCTCAGCTT CGGCGAATTG 
ATGATGGCGG TCGGCGCCTT CATCCAGGTC CAGCAGGCCC TACGCTGGTT CATCGACAAC 
GTCAGCGCCA TCGCCGACTG GCGGGCGACC CTTTTGCGGG TATCGAGCTT CCGCGAGGGG 
CTTCAGGCGA TGGATCGCCT GGGCGAGGGG AGGGGTCGCA TCGATTTCGC GCCGTCCACC 
GACAGGCAGG TCATCCTCTC GGGTCTGGAA GTCGCCTCGC CAGCCGGAGC GATCTCGCTC 
AGCCAGCCCG AGGTGGTGAT CGAGCCCGGC CAACACCTGT TGATCATCGG CGATTCGGGC 
ACCGGCAAAA CCGTGTTCTT CCGGGCCATC GCCGGGCTGT GGCCCTGGGG CAAGGGCCGC 
ATCGGCCTGC CGCCGGACGA CGACTTGCAA GACCGCGAGG GCGATGGCGT GATGTTCCTG 
CCCCGCCACC CCTACATCCC GCCCGGCACC CTGCGCGCGG CGATCTCCTA TCCCCAGGCC 
GCCGATGATT TCGACGATTG GGCCCTGGTC GAAGCGCTGG GCAGCATGGG CTTGGCCCAT 
CTCGCCGCCC GCCTCAACCG CTCGGCGCGC TGGGACAAGG AACTGACCGA CGATGAGCGC 
CGCTGCCTCG CCTTCGCCCG GGTCGCCCTG CGCAAGCCCA AGGTGGTGAT CATGGACGAG 
GCCTTCGACG TGCTCGACGA CGCCTCGCTT GGCCGGGCGA TGGCGATTTT CCGCGAAAAG 
CTGCGCAAGA CCATCGTTAT CACCATCGGC CGCCCCGAGG TCCGCGATCA TTTCTTCGAT 
CAGGTCCTGC GGCTGTCGCT TGATCCCGCC GGCCCCCGTT TCCTTCCCGA CGACCACGCC 
ACCGGCGATG CCGATCGCGA CGCGCCGACG GCCGGAGACG ACGAGGAAGG CCTTTCCGTT 
CGTGCTGTTC CCAAGGAGAG CTCGCTATGA 

 

Protein sequence

MAIPDPSPRP SPEPVKADTD ALWPQVRSMA RAFWKSPARN RLIFLGGGLA TVIALTAFGQ 
MWLNAWNQPF YDSLARKDMD GFIHQLWVFA GIAFLLLTLN VSQTWLNQST KVKLREGLVR 
DLLDDWLQGR RAFRLAFNSE IGVNPDQRIH EDARHLSELT TDLGIGLLQA SLLLATFIGV 
LWGLSRGIVL HIDGQVLAIP GYMVWCALLY AGIASLLSWK VGSPLVRLNA LRYAREADLR 
FNLVRVSEHM EGIALHGGEA DERDRLSSDL DRVLGIMRRI VGAVTGLTWI TAGYGWFTLV 
APILVAAPGY FHGNLSFGEL MMAVGAFIQV QQALRWFIDN VSAIADWRAT LLRVSSFREG 
LQAMDRLGEG RGRIDFAPST DRQVILSGLE VASPAGAISL SQPEVVIEPG QHLLIIGDSG 
TGKTVFFRAI AGLWPWGKGR IGLPPDDDLQ DREGDGVMFL PRHPYIPPGT LRAAISYPQA 
ADDFDDWALV EALGSMGLAH LAARLNRSAR WDKELTDDER RCLAFARVAL RKPKVVIMDE 
AFDVLDDASL GRAMAIFREK LRKTIVITIG RPEVRDHFFD QVLRLSLDPA GPRFLPDDHA 
TGDADRDAPT AGDDEEGLSV RAVPKESSL