| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3235 |
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| Symbol | |
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| ID | 3836682 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 3730807 |
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| End bp | 3731982 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637827351 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_428317 |
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| Protein GI | 83594565 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.185962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCCAC CCCCCGCTTC CCGGCCGCGC CGGCCTTCCC GCCGTACCCT TGTTCTGATC
CTTGGCCTTC TCGCCGCCTG CGCTCTCGGC GCCTGGGCAC TCGGCTGGTT CGGCGCCAAT
GGCGACAAGG CGCCACCGCC GCGCCAGCAG ACCGTCGAGT TGGGCAGCGT CGAAAACGCC
ATCACCGCCG TCGGCTCGCT CCAGCCCAAA ACCTATGTCG ATGTCGGCGC CCAGGTCTCG
GGCAAGGTCT CCCATCTGCC CGTCGTCATC GGCGACCGGG TGGAAAAGGG CGATCTGCTG
ACCGTCATCG ATCCCCGCAC CTATGAAGCC CGGGTGCGCA CCGACAAGGC GGCTTTGGCC
AAGCTGCACG CCGACCGCCG AAAGGCCGAG GCCCAGCTTG GGCTGTCGCG CCAGCAACGC
GCCCGCACCG AACGGCTGTT CCAGGCCAAG GCGACCAGCC AGGATTCCCT GGATTCGGCC
CGGACCACCG TTCTTGTCGA TCAGGCGGCG ATCGAATCGA TCGATGCCCA GATCGAACAG
GCCCTGGCCG AGCTTGACGC CGATCAGGCC GATCTTGATT ACACCCAGGT CTATGCGACG
ATGAGCGGCA CCATTGTGTC GATCGCCGTG GTCGAGGGGC AAACCCTGAA CTCGGTGCAA
TCGGCCCCCG ATCTGATGCG CATCGCCGAT CTCGACACCA TGACCGTCAA GGCCGAGGTC
GCCGAGGCCG ATATCACCGC GATCAAACCC GGCATGCCGG GCTATTTCAC CACCCTGGGC
GGCGGCGGAC GGCGCTGGCA GGGCACCGTG CGGCTGATCG AGCCGACCCC GGTCACCGAC
AACGACGTGG TGCTTTATAA CGTGCTGATG GATGTGGCCA ATCCCGATGG CGCGCTGATG
ACCGACATGA CCGCCCAGGT CTTTTTCCTC AAGGACCGGG CCGAGAACGT GCCGGTGGTG
CCGCTGGCAG CCTTGACGCC GACGGCGACG GCCGGCACCT GGACGGCCAG CGTGCAGGGC
CCGGGCGGCC TGGAACAGCG CACCGTGACC ACCGGCGTCG TCAATCGCGC CCTGGCCCAG
GTGGTCGACG GGCTGGCGGT TGGCGACAAG GTGGTGCTGC CGCGCGCCAC CCCGGGCGCC
ACCGCCGGCG GCTTCAAGCC GCCGCCGATG CTTTAG
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| Protein sequence | MPPPPASRPR RPSRRTLVLI LGLLAACALG AWALGWFGAN GDKAPPPRQQ TVELGSVENA
ITAVGSLQPK TYVDVGAQVS GKVSHLPVVI GDRVEKGDLL TVIDPRTYEA RVRTDKAALA
KLHADRRKAE AQLGLSRQQR ARTERLFQAK ATSQDSLDSA RTTVLVDQAA IESIDAQIEQ
ALAELDADQA DLDYTQVYAT MSGTIVSIAV VEGQTLNSVQ SAPDLMRIAD LDTMTVKAEV
AEADITAIKP GMPGYFTTLG GGGRRWQGTV RLIEPTPVTD NDVVLYNVLM DVANPDGALM
TDMTAQVFFL KDRAENVPVV PLAALTPTAT AGTWTASVQG PGGLEQRTVT TGVVNRALAQ
VVDGLAVGDK VVLPRATPGA TAGGFKPPPM L
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