| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3108 |
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| Symbol | |
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| ID | 3836554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 3578642 |
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| End bp | 3579628 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637827223 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_428190 |
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| Protein GI | 83594438 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCCC TCACAGAGAT CGATGCCCGC CATGCCGCTT GGCGTGGCCG GCGGGTGCTG
GTCACCGGCG GCGCCGGCTT CATCGGCGGC CATTTGTGCC GACGCCTGGT TGGCCTGGGG
GCCGAGGTCG TCGTTCTTGA CGACCTGAGC ACCGGCCGCC GCGACACGGT CCCCCGGGGG
GTCCGCCTGA TCGTCGGCTC GGTCACCGAC CCGGCTCTGG TGCGCAAGGC GTTGCAAGGA
ACGGAAGGCT GCTTCCACCT TGCCGCCATC GCCTCGGTGC CGCTGTCGGT CAGCGCCCTG
GTCGATTGCC ATGCCGTCAA CCAGACGGGA ACCCTGCGCC TGATCGAAGG TCTGCGCGAT
AACGGCGGCG GGCGGTTGGT CTACGCCTCG AGTTCGGCGG TCTTTGGCGA TCCGGTCGCC
CTGCCGCTGA CCATGGCCTC GCCAACGCGG CCGATCTCGC CCTATGGCGT CGACAAGCTG
GCCTGTGAAG CCCACGCCCG GGTGGCCGGC GGGCTTTATG GGCTGAAAAG CTTCGGCCTG
CGCTTCTTCA ACGTTTATGG CGAGGGGCAA TCCGACGATT CGCCCTATAG CGGCGTCATC
GCCCTCTTCA ATCGCAAGCT CCGCGACGGT CAGCCGATCA CCGTCTTTGG TGACGGCTCC
CAAAGCCGCG ACTTCGTCTA TGTCGGCGAT GTCATCGAGG GGCTGCTCGC CGCCTGGAAC
GAGGCCAGCG TCCGCGGACC GGTGGAAACC GTCGGCACCG GCTGCCCGAC CACCGTGATG
GATCTGGCCC GGACGATCAT GGAGGTCCAC GGCCGCAGCG TTCCCGTCGT TCACGCCCCG
CCGCGCGAAG CCGATATCGA ACATTCCTAC GGCAAGGCCG ATTTCCTGGC CCGCATCCTG
CCCAAGCCGG CGGTGGCTTT GCGCGCCGGG TTGGCGCGGA CGCTGTCGAT CTCTCCCCCC
GCCGCAACCT TGGCCCCAAC TCCATAG
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| Protein sequence | MTALTEIDAR HAAWRGRRVL VTGGAGFIGG HLCRRLVGLG AEVVVLDDLS TGRRDTVPRG
VRLIVGSVTD PALVRKALQG TEGCFHLAAI ASVPLSVSAL VDCHAVNQTG TLRLIEGLRD
NGGGRLVYAS SSAVFGDPVA LPLTMASPTR PISPYGVDKL ACEAHARVAG GLYGLKSFGL
RFFNVYGEGQ SDDSPYSGVI ALFNRKLRDG QPITVFGDGS QSRDFVYVGD VIEGLLAAWN
EASVRGPVET VGTGCPTTVM DLARTIMEVH GRSVPVVHAP PREADIEHSY GKADFLARIL
PKPAVALRAG LARTLSISPP AATLAPTP
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