Gene Rru_A3105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3105 
Symbol 
ID3836551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3575460 
End bp3576659 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content68% 
IMG OID637827220 
Productglycosyl transferases group 1 
Protein accessionYP_428187 
Protein GI83594435 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID[TIGR03087] sugar transferase, PEP-CTERM/EpsH1 system associated 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.147313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGATA TTCTTTTCCT GTGCCAGCGC ATCCCCTTCC CTCCCACAAA GGGGGACAAG 
ATCCGCTCGT TCCATATTCT TGACCATCTC GCGCGCCGCC ACCGCATTCA CCTTGGCACC
TTCGTCGACG ATCCCGAAGA TCGCGGCTTC GAGGCCGATC TGAAACGCTA TTGCGCCGAT
GCCCTGGTGC TGCCCTTGGA TCGCCGGGTG GCGACGGGGC GGGCGCTTTT GGCGCTGCCC
AGCGCCACCC CGCTCAGCAT CGCCTTTTAC CGCGATCGCC GCATGCAGCG CTGGGTCGAC
GGGGTGCTGG CCCGCCGCCC GGCGGCGGCC TTCCTGTTTT CCTCGGCGAT GGCCCAATAT
GTGGTCGGTC ATCCCGCCGC CCCGCCCCGG GTGGTGATGG ACTTCGTCGA TGTCGATTCC
GAGAAATGGG CGGCCTATGC CCGCGATCGC CAGGGGCCAC GGCGCTGGGT CTATGCCCGC
GAGGCCAAAC GCCTGCTCGC GTACGACCGC CAGATCGCCG CGCGGGTCGA TGCCTCGCTG
TTCGTTTCGC AAGCCGAGGC CGATCTGTTT GGCACGCTGG CGCCCGAAAG CGCCGGGCGC
ATCCACCCCC TGTCCAACGG CATCGATACC GTTTTCTTCG ATCCGACCCT GACCTATGCC
GATCCCTATT CCCCGGGCAA ACCGGTGCTG GTTTTCACCG GAGCGATGGA TTACGAGCCC
AACGTCAAGG CGGTTTGCTG GTTCGCCTCC CAGGTCCTGC CGCTGGTCCG CGCCGCCCGG
CCGGCCGCCG AATTCTGGAT CGTCGGCGCC AATCCCGCGT CGGCGGTGCG CGCCCTCGAC
CGCCATCCCG GGGTCACGGT CACCGGCCGC GTCGCCGATA TCCGCCCCTA TCTCGCCCAT
GCCGATGTGG CCGTCGCCCC GATGTTCCTC GGCCGGGGCA TTCAGAACAA GGTTCTGGAA
GCCATGGCGA TGGCCCGGCC GACGGTGGTT TCGGCCGAAG CGGTGGAAGG GATCGGCGCG
GGCGATGGCG CCGAGCTTCT GGTCGCCCCG CTTTCACCCC GGGGCTTCGC CGATGCCACG
CTTGAGGCCC TGGCCCCCGG AGCCGCCGCC CTCGGCCAGC GGGCGCGGCG CTATCTGCTT
GATGCTTTCG CCTGGGAGCG GACCATCGCC CCCTTGGGCG CCTGTCTTGG CCTGCCGTGA
 
Protein sequence
MADILFLCQR IPFPPTKGDK IRSFHILDHL ARRHRIHLGT FVDDPEDRGF EADLKRYCAD 
ALVLPLDRRV ATGRALLALP SATPLSIAFY RDRRMQRWVD GVLARRPAAA FLFSSAMAQY
VVGHPAAPPR VVMDFVDVDS EKWAAYARDR QGPRRWVYAR EAKRLLAYDR QIAARVDASL
FVSQAEADLF GTLAPESAGR IHPLSNGIDT VFFDPTLTYA DPYSPGKPVL VFTGAMDYEP
NVKAVCWFAS QVLPLVRAAR PAAEFWIVGA NPASAVRALD RHPGVTVTGR VADIRPYLAH
ADVAVAPMFL GRGIQNKVLE AMAMARPTVV SAEAVEGIGA GDGAELLVAP LSPRGFADAT
LEALAPGAAA LGQRARRYLL DAFAWERTIA PLGACLGLP