Gene Rru_A3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3093 
Symbol 
ID3836539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3558399 
End bp3559922 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content67% 
IMG OID637827208 
ProductO-antigen and teichoic acid-like export protein 
Protein accessionYP_428175 
Protein GI83594423 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.116162 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGCG GCGGGGCGAA AGGCCGGGCC CTGGTCGTCG GCGCCGCCCT GGCGATGGTG 
GCCTTTGTCG TCGAGGTGGT ATCGGCCTTC TTTCTGATGC CGTTCCTGAT CCATGCCCTG
GGCCCCGAAC GTTATGGGCT ATGGGCGCTG ATCGGCACCA TCATCGCCCA GTTCTCGTTG
CTTGATTTCG GCCTGTCGGC CACGGCGCAG CGTTACATGG CCGGGGCTTT GGCCCAAGAC
GACCGGGCGC GGGCGGGCGA GATCTTTTCG GCCGCGGCCC TGCTGTTCCT GATCGCCGGA
GGGGTCGCCT TCGCCCTCAG CCTGATCCTG GCCGGCGGCG CGCCGCTGGT GATGGCGCCG
GGCCCCGGCC GTGACGAATT CGCCCTCGCC CTGGCCATCA TGGGGGGGAT GGTCGGTCTG
TCGCTGCCGC TCAACGTCGT CCGCGGAACG GTCATGGCGC GGATGTCGTT CGCCTGGCTC
AGCGTCATCG AGATCGGCCG CGCCCTGCTG CGGGTTGGCG CGGTGGTGCT GGTCATCGAC
CAGGGGCGCG GGCTGGCGGC TTTGGCGGCG ATCACCCTGG CGATCACCGT TCTCGAGGCG
GCCGCCTTGC GTCTTTTGCT CGCCCGGGTT CTTCCCTGGC TGTCGGTCCG CCCGGGCGGT
GTGCGACGGG CGACGTTGAT CGAGCTGTTT CACTTCAGCA AGCATGTCTT CGTGGTGAAG
ATCGGCGATA TGGCGCGCTA CCGGATGGAT AATTTCATCA TCGCCCCGGT TCTGGGCCTA
AGCGCCGTCA CCCATTATTC GGCGGCCTCG CGGCTGGCCG ATACCTTCAT CTCGCTGATC
GATCGCGTTT TCACGCTGTG CGGGCCGGTG TTCTCGGGCT ATGCGGCGCT CGATGACCGC
GAGAACATGC GCGAGAAGTT CTTGCTGTTC ACCCGCTTCG CCACCCTGGC GACCGCTTGC
GCCGCCGGCG GCGTGCTGAG CGCCGGATGG ATCTTTATTC CGTTGTGGCT GGGGCCCGAG
TTCATCGACA GCTATCATGC CATGGCCGCC CTGACCGTCG GTCTGACGGC CCTGCTGATC
CAGGCGCCGA CCCGCGAGGT TCTAAGCGCG CTATACAAGC ATCCCTTCGA CGCCTGGACC
AATCTGGCCG AGGCGGTGGC CAATCTGGCG ATCAGCCTGC TGCTGGTGGG CGATTTCGGC
ATTCTCGGGG TGGCCTTGGG CACGGCGATC CCGATGGTCG TGGTCAAGAT GGGCGTGCTG
CCGGTCTATG CCTGCCGCAG GATCGGCCTC GGCGTGGGCA CCTATTATCG TCTGGTGGCG
GGCGCTCTGG CGGTGGTGGC CCTGTGCCAT CTGCCGATCG TCGCGGTGAT GGTCAGCATC
CCCCATAGCT TCCCCGCCCT GTTCACCGCC GCCCTGGTCT GTTACGGCCT GCTGGGCATG
GTTTTGTTCC GTTTCGCCCT TCCCCGGGAG ATCCGCGCCC TTCTTCTGGC CAGCCTGCGC
CCGGCGCGGG TGGCCGCGGT TTGA
 
Protein sequence
MTGGGAKGRA LVVGAALAMV AFVVEVVSAF FLMPFLIHAL GPERYGLWAL IGTIIAQFSL 
LDFGLSATAQ RYMAGALAQD DRARAGEIFS AAALLFLIAG GVAFALSLIL AGGAPLVMAP
GPGRDEFALA LAIMGGMVGL SLPLNVVRGT VMARMSFAWL SVIEIGRALL RVGAVVLVID
QGRGLAALAA ITLAITVLEA AALRLLLARV LPWLSVRPGG VRRATLIELF HFSKHVFVVK
IGDMARYRMD NFIIAPVLGL SAVTHYSAAS RLADTFISLI DRVFTLCGPV FSGYAALDDR
ENMREKFLLF TRFATLATAC AAGGVLSAGW IFIPLWLGPE FIDSYHAMAA LTVGLTALLI
QAPTREVLSA LYKHPFDAWT NLAEAVANLA ISLLLVGDFG ILGVALGTAI PMVVVKMGVL
PVYACRRIGL GVGTYYRLVA GALAVVALCH LPIVAVMVSI PHSFPALFTA ALVCYGLLGM
VLFRFALPRE IRALLLASLR PARVAAV