Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A3093 |
Symbol | |
ID | 3836539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 3558399 |
End bp | 3559922 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637827208 |
Product | O-antigen and teichoic acid-like export protein |
Protein accession | YP_428175 |
Protein GI | 83594423 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.116162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGGCG GCGGGGCGAA AGGCCGGGCC CTGGTCGTCG GCGCCGCCCT GGCGATGGTG GCCTTTGTCG TCGAGGTGGT ATCGGCCTTC TTTCTGATGC CGTTCCTGAT CCATGCCCTG GGCCCCGAAC GTTATGGGCT ATGGGCGCTG ATCGGCACCA TCATCGCCCA GTTCTCGTTG CTTGATTTCG GCCTGTCGGC CACGGCGCAG CGTTACATGG CCGGGGCTTT GGCCCAAGAC GACCGGGCGC GGGCGGGCGA GATCTTTTCG GCCGCGGCCC TGCTGTTCCT GATCGCCGGA GGGGTCGCCT TCGCCCTCAG CCTGATCCTG GCCGGCGGCG CGCCGCTGGT GATGGCGCCG GGCCCCGGCC GTGACGAATT CGCCCTCGCC CTGGCCATCA TGGGGGGGAT GGTCGGTCTG TCGCTGCCGC TCAACGTCGT CCGCGGAACG GTCATGGCGC GGATGTCGTT CGCCTGGCTC AGCGTCATCG AGATCGGCCG CGCCCTGCTG CGGGTTGGCG CGGTGGTGCT GGTCATCGAC CAGGGGCGCG GGCTGGCGGC TTTGGCGGCG ATCACCCTGG CGATCACCGT TCTCGAGGCG GCCGCCTTGC GTCTTTTGCT CGCCCGGGTT CTTCCCTGGC TGTCGGTCCG CCCGGGCGGT GTGCGACGGG CGACGTTGAT CGAGCTGTTT CACTTCAGCA AGCATGTCTT CGTGGTGAAG ATCGGCGATA TGGCGCGCTA CCGGATGGAT AATTTCATCA TCGCCCCGGT TCTGGGCCTA AGCGCCGTCA CCCATTATTC GGCGGCCTCG CGGCTGGCCG ATACCTTCAT CTCGCTGATC GATCGCGTTT TCACGCTGTG CGGGCCGGTG TTCTCGGGCT ATGCGGCGCT CGATGACCGC GAGAACATGC GCGAGAAGTT CTTGCTGTTC ACCCGCTTCG CCACCCTGGC GACCGCTTGC GCCGCCGGCG GCGTGCTGAG CGCCGGATGG ATCTTTATTC CGTTGTGGCT GGGGCCCGAG TTCATCGACA GCTATCATGC CATGGCCGCC CTGACCGTCG GTCTGACGGC CCTGCTGATC CAGGCGCCGA CCCGCGAGGT TCTAAGCGCG CTATACAAGC ATCCCTTCGA CGCCTGGACC AATCTGGCCG AGGCGGTGGC CAATCTGGCG ATCAGCCTGC TGCTGGTGGG CGATTTCGGC ATTCTCGGGG TGGCCTTGGG CACGGCGATC CCGATGGTCG TGGTCAAGAT GGGCGTGCTG CCGGTCTATG CCTGCCGCAG GATCGGCCTC GGCGTGGGCA CCTATTATCG TCTGGTGGCG GGCGCTCTGG CGGTGGTGGC CCTGTGCCAT CTGCCGATCG TCGCGGTGAT GGTCAGCATC CCCCATAGCT TCCCCGCCCT GTTCACCGCC GCCCTGGTCT GTTACGGCCT GCTGGGCATG GTTTTGTTCC GTTTCGCCCT TCCCCGGGAG ATCCGCGCCC TTCTTCTGGC CAGCCTGCGC CCGGCGCGGG TGGCCGCGGT TTGA
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Protein sequence | MTGGGAKGRA LVVGAALAMV AFVVEVVSAF FLMPFLIHAL GPERYGLWAL IGTIIAQFSL LDFGLSATAQ RYMAGALAQD DRARAGEIFS AAALLFLIAG GVAFALSLIL AGGAPLVMAP GPGRDEFALA LAIMGGMVGL SLPLNVVRGT VMARMSFAWL SVIEIGRALL RVGAVVLVID QGRGLAALAA ITLAITVLEA AALRLLLARV LPWLSVRPGG VRRATLIELF HFSKHVFVVK IGDMARYRMD NFIIAPVLGL SAVTHYSAAS RLADTFISLI DRVFTLCGPV FSGYAALDDR ENMREKFLLF TRFATLATAC AAGGVLSAGW IFIPLWLGPE FIDSYHAMAA LTVGLTALLI QAPTREVLSA LYKHPFDAWT NLAEAVANLA ISLLLVGDFG ILGVALGTAI PMVVVKMGVL PVYACRRIGL GVGTYYRLVA GALAVVALCH LPIVAVMVSI PHSFPALFTA ALVCYGLLGM VLFRFALPRE IRALLLASLR PARVAAV
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