Gene Rru_A2967 details

Gene Information

• Locus tag: Rru_A2967
• Symbol: lspA
• ID: 3836412
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 3418623
• End bp: 3419105
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637827081
• Product: lipoprotein signal peptidase
• Protein accession: YP_428049
• Protein GI: 83594297
• COG category: [M] Cell wall/membrane/envelope biogenesis; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0597] Lipoprotein signal peptidase
• TIGRFAM ID: [TIGR00077] lipoprotein signal peptidase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0888295
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCCCGG CCCTGTCGCT CGCCGCCCTG GTCATCGCCC TGGATCAGGC CACCAAATGG 
GCGATCCTGA CCTGGGTGAT GGACCCGCCC CGGGTCATCG ATGTCACCGG ATTTTTCAAT 
CTGGTGCTGG TGTGGAATCG CGGCATCAGC TTCGGGGTGA TGAACAACCA CGGCGAATGG 
AATGCCGCGA TCTTGTCGGC GCTGGCCCTG GTCATCGCCG GCAGCCTGAC TTGGTGGCTG 
CGGCGGGCGG AAACCCGCTG GCAGCGGCTG GCCCTGCCGC TGATCATCGG CGGCGCCATC 
GGCAATGTCA TCGACCGGCT GATCCACGGG GCGGTGGTCG ATTTCGTCGA TCTCAGCATC 
GCCGGATATC ATTGGCCGGC CTTCAATGTC GCCGATGCGG CGATCACCGT CGGTGCTATT 
CTCCTGCTGA TCGATACGCT GGTCCATCGC CCGCCGGTGG GCACGGATAA GGCCGGGGGT 
TGA 

 

Protein sequence

MAPALSLAAL VIALDQATKW AILTWVMDPP RVIDVTGFFN LVLVWNRGIS FGVMNNHGEW 
NAAILSALAL VIAGSLTWWL RRAETRWQRL ALPLIIGGAI GNVIDRLIHG AVVDFVDLSI 
AGYHWPAFNV ADAAITVGAI LLLIDTLVHR PPVGTDKAGG